PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428994.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 241aa    MW: 27168.9 Da    PI: 4.4958
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.98.3e-16959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+ie+  +r+v f+kRr+ ++ KA  L+ L++a+++++++s+ g+ y++ss
  XP_026428994.1  9 KKIEDRQKRNVCFTKRRHSLFNKAADLCRLTGADISLLVISPGGNPYTFSS 59
                    68***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MGKRRIEMKK IEDRQKRNVC FTKRRHSLFN KAADLCRLTG ADISLLVISP GGNPYTFSSS  60
SISWNDLNYR LKNTINFKEE KVADDERTRV SDDGFWWNNL NPEEIDSIEK LTAVRNQLLD  120
VKEKVAQRKQ ELLAAAEPIA TSTTTSTCTV GEMEEDSFLL EDDLEKLLSD AYDDAPNWLP  180
SIDDSGMLFE GLDYDESWLP LGIDTVLVLV GPAILLLLKP AKDAEKSFSC LSLLGSILPY  240
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.14e-16M-type_MADS family protein