PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428763.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 427aa MW: 48156.8 Da PI: 6.0334

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94.2	2.1e-29	68	200	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 pG F+P+d e+v+++L k ++++++ i+e++iy+++P +L +++ + k+wyfF++r++ky++g+r++r t+ gyW+a g+ +++ XP_026428763.1 68 PGWIFRPNDFEMVKYFLPWKSSNQQIPY-YPIQEANIYHCDPFKLLDdyrEHAVDGKDWYFFTTRERKYPNGDRPRRDTDggMGYWRAAGEFHNI 161 8999*********************9.77**********632345555889****************98856789******** PP NAM 93 lsk.kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 l++ +++++g+k tL +y k+++ +++kt+ mhey l XP_026428763.1 162 LDTdGETQIGVKYTLDYYigKQSDTNPVKTNIKMHEYVL 200 9967778*******5555667788*******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MDKNDQSYTL KHRETQASYR RLRSFTGQAI KERQLDLTDR IHAEGSSSSA ATQVHAPAPE 60 LAQPYREPGW IFRPNDFEMV KYFLPWKSSN QQIPYYPIQE ANIYHCDPFK LLDDYREHAV 120 DGKDWYFFTT RERKYPNGDR PRRDTDGGMG YWRAAGEFHN ILDTDGETQI GVKYTLDYYI 180 GKQSDTNPVK TNIKMHEYVL ETKDNSHAET RKRNKESKDG NNKKRKKVDE KSPKPFHALA 240 LCKIYINSSE LQEPAEVEAN PEPNIEANPE PPIVNIDSAA GPAGDEIFID INELFPEYGM 300 ELPVPQPDLD QVMTWIRGIA PACFANDNPS KKASYSSKLL SQWKSSLNQC EKTSTDGDTN 360 STPAPPISLL GVADPSKYIN HISSLIIEIS GNSPGTSSSS IVMSSPGKAV SLPIKAGFDS 420 KKLWDQL

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MDKNDQSYTL KHRETQASYR RLRSFTGQAI KERQLDLTDR IHAEGSSSSA ATQVHAPAPE  60
LAQPYREPGW IFRPNDFEMV KYFLPWKSSN QQIPYYPIQE ANIYHCDPFK LLDDYREHAV  120
DGKDWYFFTT RERKYPNGDR PRRDTDGGMG YWRAAGEFHN ILDTDGETQI GVKYTLDYYI  180
GKQSDTNPVK TNIKMHEYVL ETKDNSHAET RKRNKESKDG NNKKRKKVDE KSPKPFHALA  240
LCKIYINSSE LQEPAEVEAN PEPNIEANPE PPIVNIDSAA GPAGDEIFID INELFPEYGM  300
ELPVPQPDLD QVMTWIRGIA PACFANDNPS KKASYSSKLL SQWKSSLNQC EKTSTDGDTN  360
STPAPPISLL GVADPSKYIN HISSLIIEIS GNSPGTSSSS IVMSSPGKAV SLPIKAGFDS  420
KKLWDQL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	227	RKRNKESKDGNNKKRKK
2	223	227	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	3e-23	NAC family protein