PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428758.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 431aa MW: 48904 Da PI: 4.5207

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.7	2.5e-28	61	194	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka......eekewyfFskrdkkyatgkrknr.atk..sgyWkatg 87 p+G++F+P+dee v +yL k+ ++++l++ + ikev+iy++ P+dL ++k+ e ke+y F++r++ky++g+r+ r +t g+Wk g XP_026428758.1 61 PVGLKFRPSDEEAVLFYLVKRSRNEPLPI-SPIKEVNIYEFTPEDLLDRYKNygiegiEGKELYVFTPRERKYPNGSRPARyITGryIGFWKIVG 154 89*************************.88**********743333334555788****************6666678*** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ + +++++g+k++L f+kg++ + +kt m ey l XP_026428758.1 155 RADPIPN-ERTHIGTKRSLRFFKGTKDDFSKTPFSMTEYIL 194 **9.8899*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MGDAERTVVS SEASHENYCG LYYCWQCFIK KDSCNAKEGS SSVTPEESVD AQVERYLNNF 60 PVGLKFRPSD EEAVLFYLVK RSRNEPLPIS PIKEVNIYEF TPEDLLDRYK NYGIEGIEGK 120 ELYVFTPRER KYPNGSRPAR YITGRYIGFW KIVGRADPIP NERTHIGTKR SLRFFKGTKD 180 DFSKTPFSMT EYILKSKINS ESGHQNGGKK QDPVNLALCK IWKRLPSKKD LSPVAESSTE 240 NTDTTLLENA EYNSSGPVME AHQGSSATNM VMPTGNENSS HTNGFLQDYH IEDATNSYDS 300 FLNDEDMSFE QLDDILDCVL GDTNTEFNTF GQAMGPYQDF NLMDTVMRND GSFSNINRSS 360 QDQIAMEETF LDPFRLFGDN YLPAGEKQNG ELQVALNQEN QFESSSVVLN DLDICGSSCY 420 NHSSYHFDEQ K

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MGDAERTVVS SEASHENYCG LYYCWQCFIK KDSCNAKEGS SSVTPEESVD AQVERYLNNF  60
PVGLKFRPSD EEAVLFYLVK RSRNEPLPIS PIKEVNIYEF TPEDLLDRYK NYGIEGIEGK  120
ELYVFTPRER KYPNGSRPAR YITGRYIGFW KIVGRADPIP NERTHIGTKR SLRFFKGTKD  180
DFSKTPFSMT EYILKSKINS ESGHQNGGKK QDPVNLALCK IWKRLPSKKD LSPVAESSTE  240
NTDTTLLENA EYNSSGPVME AHQGSSATNM VMPTGNENSS HTNGFLQDYH IEDATNSYDS  300
FLNDEDMSFE QLDDILDCVL GDTNTEFNTF GQAMGPYQDF NLMDTVMRND GSFSNINRSS  360
QDQIAMEETF LDPFRLFGDN YLPAGEKQNG ELQVALNQEN QFESSSVVLN DLDICGSSCY  420
NHSSYHFDEQ K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	3e-27	NAC family protein