PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428490.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 359aa    MW: 40915.6 Da    PI: 4.4604
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11192235654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_026428490.1 192 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 235
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MEVDEQGFLE ELLSLRRESW ETFPPQMNAT TDDEMMMLSN GWSTFNCFNE MMITNNPPSL  60
HWFPPSPSLF GEMSSTKSQL DLVSLFNEMS VPFGEDLSFI MPEIDNFTFE QKQDTVPTPL  120
FIEQQDDQIV LPSPLLSNDQ PQKLIEDENN DTNLKLEQVH QASTSQIQVF ETGLARKTTK  180
VKKVEGQPSK NLMAERRRRK RLNDRLSMLR SVVPKISKMD RTSILGDTID YMKELLDRIK  240
TLRGEIDQMG GSTNNSMDIF KDIKSKEILI RNTPKFEVDR REMDTRVEIS CAGKPGLLLS  300
TMTAIEALGL EIQQCVISCF SDFAMQASCS EELEQTKIIS SDEIKQALFI SAGYGGRFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195202ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.18e-79bHLH family protein