PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026428295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NF-YA | ||||||||
Protein Properties | Length: 213aa MW: 23540 Da PI: 9.176 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.5 | 4e-32 | 120 | 176 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e+ +kl +ksrkpylheSRh hAlrR Rg+gG+F XP_026428295.1 120 EEPVYVNAKQYHAILRRRQSRAKAESANKL-IKSRKPYLHESRHLHALRRVRGCGGQF 176 69****************************.*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MTSSRRDQSS QSDDSGADEQ QQQSEIHYQH QPPAPGILHP GAASSSVEYM MPPHYEVGHA 60 VGQAYPYPDP YYRSIFAYGA QPMMHPQMMG PHQAGVPMGA QPATVPLPSD PVALPSDAVE 120 EPVYVNAKQY HAILRRRQSR AKAESANKLI KSRKPYLHES RHLHALRRVR GCGGQFLNAK 180 TDDNQQSEAS QNNKTHSRNS SDKNKNASAE KSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.1 | 2e-47 | NF-YA family protein |