PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026428095.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 185aa MW: 21099.1 Da PI: 9.957 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 77.5 | 1e-24 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k i+n nrq+t+skR+ gilKKA+EL +LC+a+v++i+fs++gk+ ey XP_026428095.1 9 KYIKNPLNRQITYSKRKSGILKKANELTILCNAQVCLIMFSKSGKIAEYV 58 579**********************************************7 PP | |||||||
2 | K-box | 39.5 | 2.3e-14 | 72 | 142 | 2 | 71 |
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllG.edLesLslkeLqqLeqqLekslkkiRskKne 71 ++++++l+ea++e lq+el+ ++ + +++e+R++ G ++L++Ls eL+ Le++L++sl +R++K e XP_026428095.1 72 RRKTNTNLWEAQYEALQEELRAQQDIGSRIKKEIRQRTGgDGLSELSCGELRVLEEDLHQSLGIVRNRKAE 142 5678889*****************************985378***************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MGRGKIEIKY IKNPLNRQIT YSKRKSGILK KANELTILCN AQVCLIMFSK SGKIAEYVSP 60 ATTIKDILDR YRRKTNTNLW EAQYEALQEE LRAQQDIGSR IKKEIRQRTG GDGLSELSCG 120 ELRVLEEDLH QSLGIVRNRK AEREKQESRL IAVPAGNDGD DQPHFTTLQM FTNWFPTATK 180 PSQSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 3e-42 | MIKC_MADS family protein |