PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026428093.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 25190.3 Da PI: 8.6096 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 74.7 | 7.1e-24 | 11 | 60 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k ien++nr+vt+skR++gilKKA EL +LC+a+v+vi++ ++gk ey XP_026428093.1 11 KYIENSTNRKVTYSKRKKGILKKARELTILCNAQVCVIMLPKSGKNAEYV 60 57*******************************************99996 PP | |||||||
2 | K-box | 41.5 | 5.7e-15 | 73 | 145 | 1 | 71 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllG..edLesLslkeLqqLeqqLekslkkiRskKne 71 yq+ +++sl+ea++e lq+el+ ++ + L++e+R++ G +dL++ s++eL +Le++Le+sl+ +R++K + XP_026428093.1 73 YQRETNTSLWEAQYEALQEELRAQQEIGRRLKKEIRQRTGqeDDLSEFSIEELGSLEKNLEESLEIVRDRKAH 145 78889999********************************5558***************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MGRRSGKLVI KYIENSTNRK VTYSKRKKGI LKKARELTIL CNAQVCVIML PKSGKNAEYV 60 SPSITMKDFL DRYQRETNTS LWEAQYEALQ EELRAQQEIG RRLKKEIRQR TGQEDDLSEF 120 SIEELGSLEK NLEESLEIVR DRKAHKEEQE FFYAVPGNSE RNQGPNYGSV SSLMRSESID 180 GRGGDFKSSE ITFLQLLQPS HTNLHNEAGG AYWYNQTIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 9e-31 | MIKC_MADS family protein |