PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428021.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 555aa MW: 60822.7 Da PI: 6.345

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	32.1	2.8e-10	172	228	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+ ++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g XP_026428021.1 172 SIYRGVTKHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDREEKAARAYDLAALKYWG 228 57*****************5444.2455536655.779999************98 PP
2	AP2	47.1	6.1e-15	273	322	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_026428021.1 273 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 322 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MGSMNNNWLS FPLSPVHSSL SHLHSSQNNQ FSLGLVTDGM DHSFENPADW NLMNAHGGGV 60 CDEIPKVADF LGVEKSDNHN DSLVFNQIPT PTQADYLLSN CNPQVTDISP ADGNAKDFES 120 SQGNVGNLQS LTLSMGTGKG SNTTDEGNSA ITTAVVEEAP RRAIDTFGQR TSIYRGVTKH 180 RWTGRYEAHL WDNSCRREGQ SRKGRQGGYD REEKAARAYD LAALKYWGTS TTTNFPISIY 240 EKELEEMKNM TRQEFVASLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL 300 GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MNRYDVKSIL ESNTLPIGGA SKRLKETQDT 360 ETLRKREEIK AIGSSFYDGN STVGGFQGYP MVPPFEQTSQ PLLALQNQQS YHHYTQEAPH 420 LQNYMQTHQL LHNPNSTSSL LHSSQSGSQF HQGFYQNQPT MLHGLMTMGP SSSLMGSNGS 480 SSNDYDEAAY FGNGLGLTAT SSSTGNAGGG IGSMTDLALV KVDYDINSGG YGGWPAETVH 540 GNGANPGSFT MWNDN

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MGSMNNNWLS FPLSPVHSSL SHLHSSQNNQ FSLGLVTDGM DHSFENPADW NLMNAHGGGV  60
CDEIPKVADF LGVEKSDNHN DSLVFNQIPT PTQADYLLSN CNPQVTDISP ADGNAKDFES  120
SQGNVGNLQS LTLSMGTGKG SNTTDEGNSA ITTAVVEEAP RRAIDTFGQR TSIYRGVTKH  180
RWTGRYEAHL WDNSCRREGQ SRKGRQGGYD REEKAARAYD LAALKYWGTS TTTNFPISIY  240
EKELEEMKNM TRQEFVASLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL  300
GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MNRYDVKSIL ESNTLPIGGA SKRLKETQDT  360
ETLRKREEIK AIGSSFYDGN STVGGFQGYP MVPPFEQTSQ PLLALQNQQS YHHYTQEAPH  420
LQNYMQTHQL LHNPNSTSSL LHSSQSGSQF HQGFYQNQPT MLHGLMTMGP SSSLMGSNGS  480
SSNDYDEAAY FGNGLGLTAT SSSTGNAGGG IGSMTDLALV KVDYDINSGG YGGWPAETVH  540
GNGANPGSFT MWNDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20840.1	1e-167	AP2 family protein