PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427924.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 381aa    MW: 43108.7 Da    PI: 6.8452
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.3e-07134154526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f+r G C +Gd+C F+Hg
  XP_026427924.1 134 ACSDFRR-GNCLRGDSCEFSHG 154
                     6******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MSSSMCAAEK DHYKKLLVHH QGGVADLPPR KQLLTRRSSN LMIPSISFDD HDDDHIESVL  60
LNFPLKFLPC NNTSEDDDDD ENDPYASDEF RIYEFKIRRC MRSRSHDWTD CPFAHPGEKA  120
RRRDPRRYHY SGNACSDFRR GNCLRGDSCE FSHGVFECWL HPTRYRTQVC KDGRNCKRKV  180
CFFAHTPKQL RVFVPPHDSP RTKPHHHLCN CVYSHSSSSS PVSSSSPTST LMGFSHLSLS  240
PPLSPTISPS SSSELTPKQQ QSLLGMLSYK SKLMELVNSL EAMDLSCINN DSPTSAAMIN  300
DNNFSWSGGG NNNISSSSPN YENQEQFFMS PNSTTTQSPG NNSGFKRRDY YNFSSNEDYG  360
YGESSSSTCP PDLDWVNELV M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25900.24e-64C3H family protein