PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427872.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 574aa MW: 64129.4 Da PI: 5.1308

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.2	3e-13	315	366	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + a+i A++++k+L+ XP_026427872.1 315 QRMTHIAVERNRRRQMNDHLNALRSLMPSS---FVQRGDQASIIGGAIDFVKELE 366 79*************************9...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MEKFQGPTSN HHCAFGGNVD EGVLQQCHGN TSFNFSYGAP YFNLEEESFT VQEEQQQQEE 60 SNTNQQSSLS LSVPITSLED KMPFLEMLKS VDSPYYSDPS PAPLNPHFKM LLTLQQQHQH 120 QQDTQIPHFS GSSSSSDQSS MDYYYSHKLE ASQPVAFQPQ SCVTATKVET QAHSSIKSED 180 NKENGEQEHM EQLEQDHAQD YYYLSLHLES ANNENNKTDN GELGGEPPSH SSPESLKTVS 240 SPTTTCCLAE TESCISPHGM PPSNTKSASK QALPAARLVT SSTTTTTGGG GGHEREKKKR 300 KRTRPNKNRE EVESQRMTHI AVERNRRRQM NDHLNALRSL MPSSFVQRGD QASIIGGAID 360 FVKELEQLLH SLEAKKRTRT SSEDEDDSEK VSIKGYKGSR RNRNCGNHSS LAPFLGFFSA 420 PQYTSYSSSL FLKNDTEEED EEEDVINEDE LRMTSSNNIN HTSSNEHEYY SLSLLSPSSW 480 LGVDIEVVVV QTHVNLKILG PRKSGQLVRV IAALEQDLRL TILHLNVTSF EQSVLYSFNL 540 KIEDDCKLGG SADEIATAVY QIFSSTNNQL HLIS

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MEKFQGPTSN HHCAFGGNVD EGVLQQCHGN TSFNFSYGAP YFNLEEESFT VQEEQQQQEE  60
SNTNQQSSLS LSVPITSLED KMPFLEMLKS VDSPYYSDPS PAPLNPHFKM LLTLQQQHQH  120
QQDTQIPHFS GSSSSSDQSS MDYYYSHKLE ASQPVAFQPQ SCVTATKVET QAHSSIKSED  180
NKENGEQEHM EQLEQDHAQD YYYLSLHLES ANNENNKTDN GELGGEPPSH SSPESLKTVS  240
SPTTTCCLAE TESCISPHGM PPSNTKSASK QALPAARLVT SSTTTTTGGG GGHEREKKKR  300
KRTRPNKNRE EVESQRMTHI AVERNRRRQM NDHLNALRSL MPSSFVQRGD QASIIGGAID  360
FVKELEQLLH SLEAKKRTRT SSEDEDDSEK VSIKGYKGSR RNRNCGNHSS LAPFLGFFSA  420
PQYTSYSSSL FLKNDTEEED EEEDVINEDE LRMTSSNNIN HTSSNEHEYY SLSLLSPSSW  480
LGVDIEVVVV QTHVNLKILG PRKSGQLVRV IAALEQDLRL TILHLNVTSF EQSVLYSFNL  540
KIEDDCKLGG SADEIATAVY QIFSSTNNQL HLIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	303	KKRKRT
2	316	327	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-42	bHLH family protein