PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427696.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 364aa    MW: 40772.1 Da    PI: 7.5618
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.21.1e-06326226
                    -S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                    k++lC+ffa  G C  Gd C F+H+
  XP_026427696.1  3 KRVLCKFFAH-GACLKGDHCEFSHD 26
                    99****6666.*************5 PP

2zf-CCCH22.71.8e-073454526
                    --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                    +C f+++ G C yG++C++ H+
  XP_026427696.1 34 ICTFYQK-GACAYGSKCRYEHV 54
                    7******.***********997 PP

3zf-CCCH20.11.1e-06146167426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     ++C+ fa+ G C++G+rC+ +Hg
  XP_026427696.1 146 PICS-FAAAGKCPRGERCPHIHG 167
                     5788.**************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MSKRVLCKFF AHGACLKGDH CEFSHDWKDQ INNICTFYQK GACAYGSKCR YEHVKASRLH  60
TSLSSASTNS HHHIPSSSVP VTCHPSRVPL SSEPSPVLSS HAELSDLSRP FFLPATSPWS  120
QESGENYLLE NENGGESTAV DPAEIPICSF AAAGKCPRGE RCPHIHGDLC PTCERYCLHP  180
YRPDEREEHT MACGRKQKHL AALKHSQEIE CSVCLDRVLS KPSAAERKFG LLSECDHPFC  240
ISCIRNWRNN SPTSGMDVNS ALRACPICRK LSYFVIPSVI WYANQEEKQD IVSSYKAKLS  300
SIDCRHFDFG NATCPFGTSC FYKHAYRDGR LEEVALRHLG AEDGDTVIAK DIRLSDFLRN  360
LQLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-151C3H family protein