PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427500.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YA
Protein Properties Length: 361aa    MW: 39907 Da    PI: 9.6385
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA88.87.5e-28195251158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p++VN+KQy+rI++RR  Rak+++ kk+ +k rkpylheSRh hA+rR+Rg+gGrF
  XP_026427500.1 195 DGPIFVNSKQYRRIMQRRLCRAKAQHGKKV-AKVRKPYLHESRHLHAMRRARGCGGRF 251
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MTMHTLFSEH PMSIPNQTSP QSPLPPVHAH WWSAAGGLGS QLLYGESFGT NNQLMKLSSS  60
SPMDNNNHNN PSLRFGDQLT DAQHGIDLSP QYQQKENYYS APRQFTILPG DGREPLLKVQ  120
KALPFTSTLP EYALRQSSRP EYQACFGLGL GQPMIRPNYP NISPHYGMYA TYGGYQTTAM  180
TQGRVMLPLN VNTEDGPIFV NSKQYRRIMQ RRLCRAKAQH GKKVAKVRKP YLHESRHLHA  240
MRRARGCGGR FLTKNASAGK GGTGIDDIQL SQLSGSLISE VAHSDSRNAN SSEGNGNIST  300
LSGSEVTSIY SRGDLYYFQI DPLPLTGFHS LPNMIDSGAQ VLSMSNKWVT VPEGYSDLLK  360
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.33e-37NF-YA family protein