PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427318.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 360aa MW: 39784.7 Da PI: 5.3672

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	7e-18	188	242	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_026427318.1 188 RKKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 242 788899***********************************************98 PP
2	HD-ZIP_I/II	128.8	2.2e-41	188	278	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk XP_026427318.1 188 RKKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 278 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MELGLSLGDT SRPFGCTTDK NRSKMMKNNK GLGFCMALGV GYNGRDEDED EEEEGDDEKS 60 SDEQRTDNDN NDSGRKVSSA DPIQLNLLPL VPVTRNQTGF PWSSENGNSD AGSRGFDVNR 120 IPASAEELDD GAAISSPNST VSSFQIDFSM YRNGGNSKRD SEIAGLNDGD NERTSSRASD 180 EEENGLARKK LRLSKEQSAF LEESFKEHNT LNPKQKVALA KQLNLRPRQV EVWFQNRRAR 240 TKLKQTEVDC EYLKRCCETL TEENRRLQKE LQELRALKTS NPYYMQLPAT TLTMCPSCER 300 VATTTTNSGS TAAAAATAPP TTTTTAPTTA TTNIQNSNPF SHKKPRFYPF SQPHHASAAS

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MELGLSLGDT SRPFGCTTDK NRSKMMKNNK GLGFCMALGV GYNGRDEDED EEEEGDDEKS  60
SDEQRTDNDN NDSGRKVSSA DPIQLNLLPL VPVTRNQTGF PWSSENGNSD AGSRGFDVNR  120
IPASAEELDD GAAISSPNST VSSFQIDFSM YRNGGNSKRD SEIAGLNDGD NERTSSRASD  180
EEENGLARKK LRLSKEQSAF LEESFKEHNT LNPKQKVALA KQLNLRPRQV EVWFQNRRAR  240
TKLKQTEVDC EYLKRCCETL TEENRRLQKE LQELRALKTS NPYYMQLPAT TLTMCPSCER  300
VATTTTNSGS TAAAAATAPP TTTTTAPTTA TTNIQNSNPF SHKKPRFYPF SQPHHASAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	245	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	5e-92	HD-ZIP family protein