PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427301.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 276aa MW: 31057.7 Da PI: 7.6327

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.5	1.1e-13	92	138	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+E+rRR+riNs +++Lr+llP + K +Ka+ L k+++++k+L XP_026427301.1 92 KNHREAEKRRRERINSHLNKLRSLLPCN-----SKTDKASLLAKVIQHVKEL 138 78***********************8.....7**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MMPENLTSSS PSELYRFLSG NDFMDAYGIH SMNNNYDFTG GIISNNNHYL GNNSRGSSFN 60 GGSSAFYQYN DVSDITDNLN QIPQARALAA SKNHREAEKR RRERINSHLN KLRSLLPCNS 120 KTDKASLLAK VIQHVKELKQ QTMEISELEL FPSETDEISV QAAGDYSVDG RSILKASLCC 180 EDRSDLLPEL IETLKSLRLK TLRAEMSTLG GRVRNVFLVT GEEDHQDHQS NIESIGFLRD 240 ALKTVMDRSN SNDRSKRRRM VDRRSITATS VITTTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	1e-64	bHLH family protein