PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427267.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 306aa    MW: 32562.9 Da    PI: 9.6363
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH32.41.6e-10273297126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     +kt+ C++fa+ G C +G++C+FaHg
  XP_026427267.1 273 FKTKMCDNFAK-GSCTFGEKCHFAHG 297
                     69*********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEPARKRGRP DAAFNGNGGF KRNKQEMETF TPGIGSKSKT CTKFFSTSGC PFGEGCHFLH  60
YVPGGISAVS QMTNLGGNQT HMQPSRHAVG PPPMTPDITS PTSAKTRMCT KFNSAEGCKF  120
GDKCYFSHGE REFGKAPSYE GSLAPSSHMM GRMPSRYEQQ PPPQSLAAAA SFGASATAKI  180
SVDSSLTGAI IGKGGVNSKQ ICRLTGVKLA IREHESDPNL KNIELEGTFD QIKQASAMVR  240
ELIVNVAAAT GPMKNHHPHG APTPAYGPGG NNFKTKMCDN FAKGSCTFGE KCHFAHGASD  300
LRKPGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.17e-55C3H family protein