PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427235.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 572aa    MW: 64180.4 Da    PI: 6.278
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3143.2e-962125703373
            GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++L+++A+ v+ +dl+laq +Larl+++ ++p g+p+qR a yf+eAL++ l+    +l        +s+++ ++++ a+k+fse+sPi+ f+++
  XP_026427235.1 212 DQLIRAADSVELNDLHLAQMILARLNQTlQNPFGKPLQRTAYYFKEALQNYLNL---NLT---CNVLSSPSDIVQKIRAYKIFSEISPIPLFANF 300
                     68*************************99************************8...222...2333334569********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     taNqa+lea +g+  +HiiDfdi+ G+QW++ +qa+ +++++     ps+RiT+++++e  s+ e + ++e+L++fA+elg++f+ ++++ +++e
  XP_026427235.1 301 TANQALLEASDGAMFIHIIDFDIGLGGQWASYMQAIVCKSKSrdfsFPSIRITAIVPEE--SSLEANLIRENLQQFARELGIRFQLEFVLYNSFE 393
                     *************************************8885434448**********66..99******************************** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklprese 280
                     +l + ++++ +gE++aVnl+ +++rll+ s s++     + ++++++sP+++v+v++e   d++++sF + f++ le+ysal++sl+a  +++ +
  XP_026427235.1 394 MLLFGSIKFINGEMIAVNLSPSIFRLLSASDSIAG----FFRFLRRISPQIIVFVDNEtcKDTENSSFRKNFINGLEFYSALLESLDAANSSDVN 484
                     ***************************77777777....*******************64455999********************999889999 PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       + +E++l++++i+  v++  +         ++Wre l+ aG+ pv+lse++++qa+ l+r+++ +g++v +++gs++l+W++r+Lvs+SaW
  XP_026427235.1 485 LVRRIEKFLIRPKIQTTVTAGRNC-------ISSWRELLSGAGMMPVALSEFTESQADWLVRRTNIRGFHVAKRQGSMLLCWHERELVSTSAW 570
                     99****************987765.......99************************************************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MKSPFTAQNN NQFFISPSSP SSSKPFTTTT TTVTTNPLKN NQNTNSSTIT NSYEPLDLRR  60
SPSPVGGGGG GGSDSVPGFT TFSSVSDESP HHHLNWNENH HQQQQTPLLP SEDWDSMIWD  120
LGNTFKVDDN KINILPQFGP FYEPNRSSPP LPPPQFPTSS ENPPFNSSFP VVKTEIHPNH  180
HQNHSNFHPG GVVVVDSIDN SNNLQFDCSQ LDQLIRAADS VELNDLHLAQ MILARLNQTL  240
QNPFGKPLQR TAYYFKEALQ NYLNLNLTCN VLSSPSDIVQ KIRAYKIFSE ISPIPLFANF  300
TANQALLEAS DGAMFIHIID FDIGLGGQWA SYMQAIVCKS KSRDFSFPSI RITAIVPEES  360
SLEANLIREN LQQFARELGI RFQLEFVLYN SFEMLLFGSI KFINGEMIAV NLSPSIFRLL  420
SASDSIAGFF RFLRRISPQI IVFVDNETCK DTENSSFRKN FINGLEFYSA LLESLDAANS  480
SDVNLVRRIE KFLIRPKIQT TVTAGRNCIS SWRELLSGAG MMPVALSEFT ESQADWLVRR  540
TNIRGFHVAK RQGSMLLCWH ERELVSTSAW MC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-120GRAS family protein