PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026427118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 468aa MW: 51293 Da PI: 6.3747 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.6e-18 | 41 | 88 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed +lv++v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_026427118.1 41 KGPWTSQEDAILVEYVNKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 88 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.4e-15 | 94 | 137 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E+ +v++++++G++ W++ a++++ gRt++++k++w++ XP_026427118.1 94 KGAFTADEERMIVELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 137 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 468 aa Download sequence |
MSHSSNDSED DLLSKDQSDS QSIDEGSCGG SFGVGGVILK KGPWTSQEDA ILVEYVNKHG 60 EGNWNAVQKH SGLSRCGKSC RLRWANHLRP NLKKGAFTAD EERMIVELHA KMGNKWARMA 120 AHLPGRTDNE IKNYWNTRIK RRQRAGLPLY PPEVRMQTLN GNYQYQKSDE FNNVDMQQHG 180 LLHANSYEIP DVTFDGLKGN QGFLSYEHAL PDMSVGMLPQ GLGSSLNYNF YPTTMHRLKR 240 LRDPENLFPG FNSSLASSAV SPFDPFQSES CEKIHQPPFG LTFPYVPNRN KIKKSSPFGA 300 RSGSHAFSNG NFSTSKLING PVKLELPSFQ YPDTDVGGCW GTSPVLPSLE SVDTFTQSSP 360 LSNGQVQSDC LSSRNSGLLD ALLQEAQTLK NQSSEKSSSS SVVTPSDLMD GSNLDLCETG 420 WEDYRDPISP LGRSAASVFG GCTPISGSST DDPALSESLP AASCRIQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11440.1 | 8e-99 | MYB family protein |