PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026427006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 756aa MW: 83264.3 Da PI: 5.1676 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.6 | 7e-06 | 451 | 471 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 C f+++ G+C+ d+CkF+H+ XP_026427006.1 451 YCEFYLK-GICQKRDSCKFSHD 471 5******.*************7 PP | |||||||
2 | zf-CCCH | 19 | 2.5e-06 | 505 | 525 | 5 | 25 |
--SGGGGTS--TTTTT-SS-S CS zf-CCCH 5 lCrffartGtCkyGdrCkFaH 25 +C+++a +G C +Gd+C F+H XP_026427006.1 505 PCSNYATSGSCFRGDKCLFSH 525 7******************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 756 aa Download sequence |
MRNQTLITSM GEVIFHSRFR HRRSHLKSKT VDTLLKIISL CADDDQEESQ ISSPIVSDAL 60 NSGVRRNDSE NELVKDKNVE VLLGECEKLS IVNDLSVDDY SIENENLLTE NVNWAMASNL 120 LSDENVEPLG VEDSRILDGV ASSVVKNCSD NNIEEPQQGN VDEIKVVDEH VTDEIREPIR 180 ITEDMQMQSS SSEQNVVNGV GGESQWGEMG LTEPVNLDSS IRCLTDMDIE DDEIPDGLGL 240 YNEFVSLIHE GLAQNEEKSG GEDHIYYEVI KEREVENEHQ DDTGAEENHM SSTCIQGEIQ 300 LKTNGGKLDR NLKRGYGDDL LQGAGDSGKE NDEANVDAIT KRVCLSDRNL KRGYGDDWLQ 360 EVGDSGRENS KSKAAAATEE VGLCNRKLER GYEGDWLRDS RTSGKGNGGA KATETTKKMN 420 ERKKRAQTRK EQGVKRLRIE PPISKPKVPK YCEFYLKGIC QKRDSCKFSH DTTPLTKSQP 480 CKFLALQQCL KGDDCPFDHQ LAKYPCSNYA TSGSCFRGDK CLFSHKIGKT SKPYDVSPTE 540 AVSQPLPNNL NSKSSLNTKN ISPCTLNIIS SGASLKTPSS TGNQFLKNPE QSVLGKLRPP 600 AQPPKGVTLL SFSKTPPNNS SNKADSNSTE ASTRKDQESL KPPPSLDELF QKNTTSTPSS 660 ASQYSQNPLQ NVQNKNSAKR APSSTLNFAA KYESEMKKNR SKTPTGLSTT NTTTDSSKTP 720 TSTASSSIDN IQNRLLKASP LLQEFLFGFG GTDGKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 697 | 703 | KKNRSKT |