PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427006.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 756aa    MW: 83264.3 Da    PI: 5.1676
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.67e-06451471526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C f+++ G+C+  d+CkF+H+
  XP_026427006.1 451 YCEFYLK-GICQKRDSCKFSHD 471
                     5******.*************7 PP

2zf-CCCH192.5e-06505525525
                     --SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                     +C+++a +G C +Gd+C F+H
  XP_026427006.1 505 PCSNYATSGSCFRGDKCLFSH 525
                     7******************** PP

Sequence ? help Back to Top
Protein Sequence    Length: 756 aa     Download sequence    
MRNQTLITSM GEVIFHSRFR HRRSHLKSKT VDTLLKIISL CADDDQEESQ ISSPIVSDAL  60
NSGVRRNDSE NELVKDKNVE VLLGECEKLS IVNDLSVDDY SIENENLLTE NVNWAMASNL  120
LSDENVEPLG VEDSRILDGV ASSVVKNCSD NNIEEPQQGN VDEIKVVDEH VTDEIREPIR  180
ITEDMQMQSS SSEQNVVNGV GGESQWGEMG LTEPVNLDSS IRCLTDMDIE DDEIPDGLGL  240
YNEFVSLIHE GLAQNEEKSG GEDHIYYEVI KEREVENEHQ DDTGAEENHM SSTCIQGEIQ  300
LKTNGGKLDR NLKRGYGDDL LQGAGDSGKE NDEANVDAIT KRVCLSDRNL KRGYGDDWLQ  360
EVGDSGRENS KSKAAAATEE VGLCNRKLER GYEGDWLRDS RTSGKGNGGA KATETTKKMN  420
ERKKRAQTRK EQGVKRLRIE PPISKPKVPK YCEFYLKGIC QKRDSCKFSH DTTPLTKSQP  480
CKFLALQQCL KGDDCPFDHQ LAKYPCSNYA TSGSCFRGDK CLFSHKIGKT SKPYDVSPTE  540
AVSQPLPNNL NSKSSLNTKN ISPCTLNIIS SGASLKTPSS TGNQFLKNPE QSVLGKLRPP  600
AQPPKGVTLL SFSKTPPNNS SNKADSNSTE ASTRKDQESL KPPPSLDELF QKNTTSTPSS  660
ASQYSQNPLQ NVQNKNSAKR APSSTLNFAA KYESEMKKNR SKTPTGLSTT NTTTDSSKTP  720
TSTASSSIDN IQNRLLKASP LLQEFLFGFG GTDGKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1697703KKNRSKT