PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026427004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 779aa MW: 85896.5 Da PI: 5.6797 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.5 | 7.2e-06 | 474 | 494 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 C f+++ G+C+ d+CkF+H+ XP_026427004.1 474 YCEFYLK-GICQKRDSCKFSHD 494 5******.*************7 PP | |||||||
2 | zf-CCCH | 19 | 2.6e-06 | 528 | 548 | 5 | 25 |
--SGGGGTS--TTTTT-SS-S CS zf-CCCH 5 lCrffartGtCkyGdrCkFaH 25 +C+++a +G C +Gd+C F+H XP_026427004.1 528 PCSNYATSGSCFRGDKCLFSH 548 7******************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 779 aa Download sequence |
MRNQTLITSM GEVIFHSRFR HRRSHLKSKT VDTLLKIISL CADDDQEESQ ISSPIVSDAL 60 NSGVRRNDSE NELVKDKNVE VLLGECEKLS IVNDLSVDDY SIENENLLTE NVNWAMASNL 120 LSDENVEPLG VEDSRILDGV ASSVVKNCSD NNIEEPQQGN VDEIKVVDEH VTDEIREPIR 180 ITEDMQMQSS SSEQNVVNGV GGESQWGEMG LTEPVNLDSS IRCLTDMDIE DDEIPDGLGL 240 YNEFVSLIHE GLAQNEEKSG GEDHIYYEVI KEREVENEHQ DDTGAEENHM SSTCIQGEIQ 300 LKTNGGKLDR NLKRGYGDDL LQGAGDSGKE NDEANVDAIT KRVCLSDRNL KRGYGDDWLQ 360 EVGDSGRENS KSKAAAATEE VGLCNRKLER GYEGDWLRDS RTSGKGNGGA KATETTKKLQ 420 NTKVGEKRPI ILSKEIKAKK KMNERKKRAQ TRKEQGVKRL RIEPPISKPK VPKYCEFYLK 480 GICQKRDSCK FSHDTTPLTK SQPCKFLALQ QCLKGDDCPF DHQLAKYPCS NYATSGSCFR 540 GDKCLFSHKI GKTSKPYDVS PTEAVSQPLP NNLNSKSSLN TKNISPCTLN IISSGASLKT 600 PSSTGNQFLK NPEQSVLGKL RPPAQPPKGV TLLSFSKTPP NNSSNKADSN STEASTRKDQ 660 ESLKPPPSLD ELFQKNTTST PSSASQYSQN PLQNVQNKNS AKRAPSSTLN FAAKYESEMK 720 KNRSKTPTGL STTNTTTDSS KTPTSTASSS IDNIQNRLLK ASPLLQEFLF GFGGTDGKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 720 | 726 | KKNRSKT |