PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426814.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 390aa MW: 42135.8 Da PI: 9.0003

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82	5e-26	151	194	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_026426814.1 151 DPEPGRCRRTDGKKWRCSRDVVPGQKYCERHVHRGRNRSRKPVE 194 79***************************************987 PP
2	QLQ	40	1.2e-14	79	113	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 F+ +Q q+L+ Q+l++Ky++a++ +P+eLl i+ XP_026426814.1 79 LFSISQRQELELQALIFKYMLAGAVIPSELLHSIK 113 6999**************************98885 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MEYDHLNQWR NQQHQLEQGS AAKIPRLGVD SDHTETALPL FVPEPSAVKI SSLSAFPDSL 60 TTVAAASPYN RFPRLGGGLF SISQRQELEL QALIFKYMLA GAVIPSELLH SIKTSFINAP 120 SCCHYPHQQL YQHYQPAAMM QSGYWGRGSM DPEPGRCRRT DGKKWRCSRD VVPGQKYCER 180 HVHRGRNRSR KPVEIPTPAA GVGNGGGGGG GLRIANATIA SSPASMMSGG SNFSLSGSPS 240 IELLHLNQRS SENRVGNHDN NMSGEAKPDG QVLRHFFDDW PRSNQKSNSS PATSTTCLSI 300 STPGNNNPSS DFSLKLSTGN VDDREMNGGG AERRQMNWGG GWGTHQMSSM GGGPLAEALR 360 SSSITNSSSP TSVLHELRRG SISETSSVST

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MEYDHLNQWR NQQHQLEQGS AAKIPRLGVD SDHTETALPL FVPEPSAVKI SSLSAFPDSL  60
TTVAAASPYN RFPRLGGGLF SISQRQELEL QALIFKYMLA GAVIPSELLH SIKTSFINAP  120
SCCHYPHQQL YQHYQPAAMM QSGYWGRGSM DPEPGRCRRT DGKKWRCSRD VVPGQKYCER  180
HVHRGRNRSR KPVEIPTPAA GVGNGGGGGG GLRIANATIA SSPASMMSGG SNFSLSGSPS  240
IELLHLNQRS SENRVGNHDN NMSGEAKPDG QVLRHFFDDW PRSNQKSNSS PATSTTCLSI  300
STPGNNNPSS DFSLKLSTGN VDDREMNGGG AERRQMNWGG GWGTHQMSSM GGGPLAEALR  360
SSSITNSSSP TSVLHELRRG SISETSSVST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	2e-70	GRF family protein