PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026426648.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 476aa    MW: 53363.2 Da    PI: 5.9956
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026426648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS471.64.3e-144494711374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++l+l+cA++v++g+le+a+  L+++s+laspdgd+mqR+aayfteALa r+++ +++l kal++++    + se + a+klf+e++P++k+s+
  XP_026426648.1  49 LIHLILSCANHVAAGSLENANIGLEQISHLASPDGDTMQRIAAYFTEALADRILKAWPGLHKALNSTRLC--SISEGILARKLFFELCPFVKLSF 141
                     689*************************************************************988887..59********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaIlea+ege++vHiiD+++ +++QW+aLlqaL++Rp+gpp+lRiTg+++    +ke l +t+ rL++ Ae+l++pf+fn+ +  +le+l+
  XP_026426648.1 142 VITNQAILEAMEGEKMVHIIDLNAAEPAQWIALLQALSARPDGPPHLRITGIHE----QKEVLDQTALRLTEEAEKLDIPFQFNP-IICKLENLD 231
                     ******************************************************....9**************************.5778***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll........................................................desvsleserdevLk 229
                     +e+Lrvk+gEala+++vlqlh+ll                                                          s+s++ + +++L 
  XP_026426648.1 232 VERLRVKTGEALAISSVLQLHSLLasddenarkksppvsrssnsvnlqralqmnqgtlgellekdmvngyspspdsasssPASLSTSPKMESLLA 326
                     ****************************************************************************9977444444447888*** PP

            GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324
                     ++++lsPk++vv+eqe++hn+++F+er+leal++y++lfd+le++++r+s erikvE++l+g+ei+n++aceg er+erhe+l kW +r++ aGF
  XP_026426648.1 327 ALWGLSPKIMVVTEQESNHNGSTFMERLLEALYFYASLFDCLESTISRNSMERIKVEKMLFGEEIKNIIACEGIERKERHEKLDKWMQRFDFAGF 421
                     *********************************************************************************************** PP

            GRAS 325 kpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + vp+s++   qak+ll++++ dgy+++ee+g+lvl+W+dr+L+svSaWr
  XP_026426648.1 422 GRVPMSYYGHLQAKRLLQNYGCDGYNIKEENGCLVLCWQDRSLFSVSAWR 471
                     *************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MARMVQDEGS SSVTSSPLQF FSLMSLSPSL GSPYPWLREL KSEERGLYLI HLILSCANHV  60
AAGSLENANI GLEQISHLAS PDGDTMQRIA AYFTEALADR ILKAWPGLHK ALNSTRLCSI  120
SEGILARKLF FELCPFVKLS FVITNQAILE AMEGEKMVHI IDLNAAEPAQ WIALLQALSA  180
RPDGPPHLRI TGIHEQKEVL DQTALRLTEE AEKLDIPFQF NPIICKLENL DVERLRVKTG  240
EALAISSVLQ LHSLLASDDE NARKKSPPVS RSSNSVNLQR ALQMNQGTLG ELLEKDMVNG  300
YSPSPDSASS SPASLSTSPK MESLLAALWG LSPKIMVVTE QESNHNGSTF MERLLEALYF  360
YASLFDCLES TISRNSMERI KVEKMLFGEE IKNIIACEGI ERKERHEKLD KWMQRFDFAG  420
FGRVPMSYYG HLQAKRLLQN YGCDGYNIKE ENGCLVLCWQ DRSLFSVSAW RCRRYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein