PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426624.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 440aa MW: 49096.8 Da PI: 6.5101

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46	1.3e-14	92	151	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse...ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+ ++ k ++++lg ++ +e Aa ++ a++k++g XP_026426624.1 92 SIYRGVTRHRWTGRYEAHLWDkNSWnpiQNkKGRQVYLGAYDDEEAAAHTYDLAALKYWG 151 57*****************888855544455***********************98 PP
2	AP2	48.6	2e-15	194	245	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + +k+ +lg++ t eeAa+a++ a+ + +g XP_026426624.1 194 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTYSTQEEAAAAYDIAAIEHRG 245 89**99******988422...5********************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MMLMMMKRSP HSSDSCSSSS SSSSSSTNSS EIKPLTSLIS TTNQLLVPLS PLPPPHTLPS 60 KLKPVKPKTK RTRRTSNPEK AKFAACPGRR SSIYRGVTRH RWTGRYEAHL WDKNSWNPIQ 120 NKKGRQVYLG AYDDEEAAAH TYDLAALKYW GPDTILNFPF ITYQKDFDDM QLVTKEEYLA 180 SLRRRSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVLGNKY LYLGTYSTQE EAAAAYDIAA 240 IEHRGMNAVT NFDISHYSGL IKCTQPSPSP SPSPPQQLCQ QYQQSPSCSY FAESHEMTSR 300 ILTPELPQSV NDHSPVMVDP MEDNAWSLCM DSGFNPLPVP NIDLEKSGEL PDLFNDSGFE 360 DNIECLFEGI NATKEEFGSL EEKDNALNFD TFFNSSIDFD SGDLLGSLGV EGEENLNSNG 420 TSARNASASV PYPFPIRICS

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MMLMMMKRSP HSSDSCSSSS SSSSSSTNSS EIKPLTSLIS TTNQLLVPLS PLPPPHTLPS  60
KLKPVKPKTK RTRRTSNPEK AKFAACPGRR SSIYRGVTRH RWTGRYEAHL WDKNSWNPIQ  120
NKKGRQVYLG AYDDEEAAAH TYDLAALKYW GPDTILNFPF ITYQKDFDDM QLVTKEEYLA  180
SLRRRSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVLGNKY LYLGTYSTQE EAAAAYDIAA  240
IEHRGMNAVT NFDISHYSGL IKCTQPSPSP SPSPPQQLCQ QYQQSPSCSY FAESHEMTSR  300
ILTPELPQSV NDHSPVMVDP MEDNAWSLCM DSGFNPLPVP NIDLEKSGEL PDLFNDSGFE  360
DNIECLFEGI NATKEEFGSL EEKDNALNFD TFFNSSIDFD SGDLLGSLGV EGEENLNSNG  420
TSARNASASV PYPFPIRICS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	5e-85	AP2 family protein