PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426406.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 714aa MW: 78092.8 Da PI: 6.334

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.2	3.7e-28	210	263	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026426406.1 210 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVDRLTRENVASHLQKYRL 263 79*****************.******************************8 PP
2	Myb_DNA-binding	37.9	4.1e-12	212	262	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++t++++ s++qky+ XP_026426406.1 212 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvDRLTRENVASHLQKYR 262 678***********************************************7 PP
3	Response_reg	76.6	9e-26	29	137	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ + +++l+++l++ +y +v++++++ al++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++a+g+ + + + G XP_026426406.1 29 VLAVDDDLICLRVLESLLRRCQY-HVTTTTQAVTALKMLRENRdkFDLVISDVQMPDMDGFKLLELVGL-EMDLPVIMLSANGDTRNVMRGITHG 121 799******************.***********999889***************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_026426406.1 122 ACDYLLKPVRIEELKN 137 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MTVEELLIRG SSGSEDEQKI DLFPIGMRVL AVDDDLICLR VLESLLRRCQ YHVTTTTQAV 60 TALKMLRENR DKFDLVISDV QMPDMDGFKL LELVGLEMDL PVIMLSANGD TRNVMRGITH 120 GACDYLLKPV RIEELKNIWQ HVLRKKKVEP KDQNNLDKLN PGMGDSGKGH SMSGNDDQNK 180 LNRKRKDQNE EDDDECDDEN DNDDPSSQKK PRVVWSVELH RKFVAAVNQL GIDKAVPKKI 240 LDLMNVDRLT RENVASHLQK YRLYLKRISC VASQQANMVA ALGGKDASYL RMSSLDGLGD 300 FHGFGGPGQL PNGSLASYSP VGMLGRLNTP VGMGLRGPSS GMMQLGRPHN PTNSVHDLGK 360 LRQIVIPGNQ NGNFLQGMPT SLELDQLQQS KSIARVGEFS SSIDPRAFPG PSSFPDTGVT 420 IANSNNSFQN VHSNSLLLLG GPQQTQNRAG FGNQSSVRMP SVHSESFEFG FGASSHLPDL 480 GRCNDNWPSA APISGFPSNP LPLGDNPFGH ANLSSDILRD NISSINATIG SNSIGVSSNS 540 ITNQLDSRRD LQPGPIGVAQ HDKFSSFVNL GDNVGQSMNL VPKQKWISHK QDYNQTSNLL 600 FSSSSPSVPI HGVADPLGQN STMSNRKTDL ISTSQPTAAS HSYLTRHNGI EKSSIDMTED 660 FLLDPNKSQG GAVMSNSCGS LEDLMSAMIK REREEVTLRD GDIGYDIFPV RTCM

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MTVEELLIRG SSGSEDEQKI DLFPIGMRVL AVDDDLICLR VLESLLRRCQ YHVTTTTQAV  60
TALKMLRENR DKFDLVISDV QMPDMDGFKL LELVGLEMDL PVIMLSANGD TRNVMRGITH  120
GACDYLLKPV RIEELKNIWQ HVLRKKKVEP KDQNNLDKLN PGMGDSGKGH SMSGNDDQNK  180
LNRKRKDQNE EDDDECDDEN DNDDPSSQKK PRVVWSVELH RKFVAAVNQL GIDKAVPKKI  240
LDLMNVDRLT RENVASHLQK YRLYLKRISC VASQQANMVA ALGGKDASYL RMSSLDGLGD  300
FHGFGGPGQL PNGSLASYSP VGMLGRLNTP VGMGLRGPSS GMMQLGRPHN PTNSVHDLGK  360
LRQIVIPGNQ NGNFLQGMPT SLELDQLQQS KSIARVGEFS SSIDPRAFPG PSSFPDTGVT  420
IANSNNSFQN VHSNSLLLLG GPQQTQNRAG FGNQSSVRMP SVHSESFEFG FGASSHLPDL  480
GRCNDNWPSA APISGFPSNP LPLGDNPFGH ANLSSDILRD NISSINATIG SNSIGVSSNS  540
ITNQLDSRRD LQPGPIGVAQ HDKFSSFVNL GDNVGQSMNL VPKQKWISHK QDYNQTSNLL  600
FSSSSPSVPI HGVADPLGQN STMSNRKTDL ISTSQPTAAS HSYLTRHNGI EKSSIDMTED  660
FLLDPNKSQG GAVMSNSCGS LEDLMSAMIK REREEVTLRD GDIGYDIFPV RTCM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-128	ARR-B family protein