PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026426203.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRF
Protein Properties Length: 360aa    MW: 39565.7 Da    PI: 9.4434
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026426203.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC60.82.2e-1999137139
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrs 39 
                     d+epgrCrRtDGKkWRC +++ + +k+CErH+ + ++++
  XP_026426203.1  99 DPEPGRCRRTDGKKWRCAKDAFPESKYCERHMRKRKNNN 137
                     79*******************************999886 PP
2QLQ44.54.6e-162357236
             QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                     FT +Q+ +L +Q+l++KyL+++ +vPpeLl++i 
  XP_026426203.1 23 IFTVSQWKELQHQALIFKYLLSGHQVPPELLLPIH 57
                    59*******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MFEMSRGGIG VGGGGGRDPV AAIFTVSQWK ELQHQALIFK YLLSGHQVPP ELLLPIHNSS  60
FYFDSTSSSS PSNFFLTSAT ATAPMEGYYA SSYYGKKMDP EPGRCRRTDG KKWRCAKDAF  120
PESKYCERHM RKRKNNNAGS RKPVEIHTSL SSMPTTPSLS RISALTSLST GGGSGMTTAN  180
NGGSFFPLLS MGNNNDQRYS YATKSQTTEN GFFLNTSQSA KSFGMQSSLD NTYGSILPQA  240
SLVSPSKLRN GSLSLSDYPQ ALTLQNLRYA TSTTNQPKQP ARQQYWSFDS ESASRDTMKH  300
DNQSLQVQSS YEDWPNKTRD YWLDQNDNSD HSPFSTTTQL SMSMPVASFG SSAASSHSPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.17e-29GRF family protein