PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425957.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 401aa MW: 45949.4 Da PI: 8.5211

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.1	9e-15	12	123	1	98
EEEE-..-HHHHTT-EE--HHH.HTT....................---.....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHH CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....................ggkke...esktltledesgrsWevkliyrkksgryvltkGWkeFvkan 72 f+k+l + + +++ + +pk+f e++ + e + +tl+de+g ++ vk++y+ ks +++GW++Fvk + XP_026425957.1 12 FCKALERTHLVTRSTFPIPKHFQETItrpneetvtqqneetvtqkdE---EtvtHEEIVTLKDEEGGKYIVKYKYKSKS----FQGGWSGFVKNQ 99 78888888889999999***9999999998888777666665542...14556679***********655555....9******* PP T--TT-EEEEEE-SSSEE..EEEEE- CS B3 73 gLkegDfvvFkldgrsefelvvkvfr 98 +L++gD vvF + ++f + v +fr XP_026425957.1 100 DLRVGDAVVFNQI--DRFVFDVYMFR 123 *********55..45655666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MKSLPDFIES CFCKALERTH LVTRSTFPIP KHFQETITRP NEETVTQQNE ETVTQKDEET 60 VTHEEIVTLK DEEGGKYIVK YKYKSKSFQG GWSGFVKNQD LRVGDAVVFN QIDRFVFDVY 120 MFRARDKSEN VVCQHQCKSK CAADKASTST SFTEARESIC PEAMSLRTEL EELKQKLLEM 180 AQDRDRLLLQ VNSLSYAVKY NGESSVQESK NLLIKTLERD LADVRGKLQV SSKKNMEVQS 240 ELESRNKLVD TLKKELVEAE KLRIKLQNKI LELKGNIRVF CRVRPPVHDD GKQIKISYPK 300 SVEEKGHAIH LSKNGYLHKF AFDRVFDPKA KQEDIFVDVS ELVQSALDGK KVCIFAYGQT 360 GSGKTYTMIG GLDQKDKEEK GIIPRSVEQI FQYFQSVKTK G

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MKSLPDFIES CFCKALERTH LVTRSTFPIP KHFQETITRP NEETVTQQNE ETVTQKDEET  60
VTHEEIVTLK DEEGGKYIVK YKYKSKSFQG GWSGFVKNQD LRVGDAVVFN QIDRFVFDVY  120
MFRARDKSEN VVCQHQCKSK CAADKASTST SFTEARESIC PEAMSLRTEL EELKQKLLEM  180
AQDRDRLLLQ VNSLSYAVKY NGESSVQESK NLLIKTLERD LADVRGKLQV SSKKNMEVQS  240
ELESRNKLVD TLKKELVEAE KLRIKLQNKI LELKGNIRVF CRVRPPVHDD GKQIKISYPK  300
SVEEKGHAIH LSKNGYLHKF AFDRVFDPKA KQEDIFVDVS ELVQSALDGK KVCIFAYGQT  360
GSGKTYTMIG GLDQKDKEEK GIIPRSVEQI FQYFQSVKTK G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	2e-08	B3 family protein