PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425954.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 437aa    MW: 49812.9 Da    PI: 9.0868
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.81.1e-1448159198
                     EEEE-..-HHHHTT-EE--HHH.HTT....................---.....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHH CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....................ggkke...esktltledesgrsWevkliyrkksgryvltkGWkeFvkan 72 
                     f+k+l + +  +++ + +pk+f e++                    +   e    +  +tl+de+g ++ vk++y+ ks    +++GW++Fvk +
  XP_026425954.1  48 FCKALERTHLVTRSTFPIPKHFQETItrpneetvtqqneetvtqkdE---EtvtHEEIVTLKDEEGGKYIVKYKYKSKS----FQGGWSGFVKNQ 135
                     78888888889999999*****9999999998888776666665542...14556679***************655555....9*********** PP

                     T--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  73 gLkegDfvvFkldgrsefelvvkvfr 98 
                     +L++gD vvF  +  ++f + v +fr
  XP_026425954.1 136 DLRVGDAVVFNQI--DRFVFDVYMFR 159
                     ***********55..45655666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MTKASASASA SAMSRVRAKR VPTQQEIDAL DRATKFMKSL PDFIESCFCK ALERTHLVTR  60
STFPIPKHFQ ETITRPNEET VTQQNEETVT QKDEETVTHE EIVTLKDEEG GKYIVKYKYK  120
SKSFQGGWSG FVKNQDLRVG DAVVFNQIDR FVFDVYMFRA RDKSENVVCQ HQCKSKCAAD  180
KASTSTSFTE ARESICPEAM SLRTELEELK QKLLEMAQDR DRLLLQVNSL SYAVKYNGES  240
SVQESKNLLI KTLERDLADV RGKLQVSSKK NMEVQSELES RNKLVDTLKK ELVEAEKLRI  300
KLQNKILELK GNIRVFCRVR PPVHDDGKQI KISYPKSVEE KGHAIHLSKN GYLHKFAFDR  360
VFDPKAKQED IFVDVSELVQ SALDGKKVCI FAYGQTGSGK TYTMIGGLDQ KDKEEKGIIP  420
RSVEQIFQYF QSVKTKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-09B3 family protein