PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425896.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 444aa    MW: 48979.2 Da    PI: 6.9398
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.79e-13378423655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  XP_026425896.1 378 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 423
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MYSGSQTSAK DMNLLFPSSS TFKNSSEGGG GGDNLQRNRE ASMDVNLFHR RQPNHQQNQQ  60
QFNSGLMRYR SAPSSLLEKL INGEDEGGCD NFIPPPTHSS PSEAESIFAR FMSIAGNDSS  120
DLREINEKSA ANNRNPPQFM EQEETIEENN VFPPTSQMMF QNPSIPSSQP QQNSLQRQNS  180
LNPTESPYRG VNSVNIDQNS SPLKMGSATN STSNLIRHSS SPAGLFANLN VENGYAVMRG  240
MWTAGNSRLK SQMSFPSRPP TSSGLMSQIS EIESEGGNSG EEGSLSNGNN RFIPGFPVAC  300
WDDGLDNFGG VKRARDINNK MMNPSEAQSG EVGNHTTGLT HHFSLPKNSA EMAAILQYQD  360
SVPCKIRAKR GCATHPRSIA ERVRRTRISE RMRKLQELVP NMDKQTNTAD MLDLAVEYIK  420
DLQTQVKTLN DNQLNCTCSN KQKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-70bHLH family protein