PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425790.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 449aa MW: 48968.9 Da PI: 4.9319

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	65.9	1.4e-20	20	78	4	62
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikel 62 +k+ ++h+kv+gR+ R+R++a+ca +F+L++eLG+ +d++t+ WLl+q p+ + XP_026425790.1 20 RKRGITDRHAKVDGRGCRIRIPASCAPGIFQLTNELGHRSDGETVHWLLEQIRPELVDN 78 677778*********************************************99987654 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MGEPRNRIQS SQQESITNKR KRGITDRHAK VDGRGCRIRI PASCAPGIFQ LTNELGHRSD 60 GETVHWLLEQ IRPELVDNSY KSPLKSLPPP LSDPIASPNP VAFSYLDDYS SENSNPATSS 120 GHDVVDDEEN LIDNGVRPTI RATVVQASTI FYDTPATLDK AERLIAGAAA YGAELVVFPE 180 AFVGGYPRIP NFGVTGGRNS IEENDEFQKY HASAIDVPGP EVDRLAGIAR KYEVHLVMGV 240 VEREGSILYS SVIYFDCQGQ YLGGHRKVML TALEHDVWHS GDKATLPAYK TSIGNIGGLI 300 CWDNRMPLLR SELYSKGVEI YCVPTADARD TWRASMTHTA IEGGCFVISA NQYCQRKDYP 360 LQQQCVSGDS NSELSPDSVV CSGGSIIISP SGAILAGPNY QEESLISADL DLGEIERAKL 420 EFHGVVGVGH TVWPESLNPL AFTAKVENC

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MGEPRNRIQS SQQESITNKR KRGITDRHAK VDGRGCRIRI PASCAPGIFQ LTNELGHRSD  60
GETVHWLLEQ IRPELVDNSY KSPLKSLPPP LSDPIASPNP VAFSYLDDYS SENSNPATSS  120
GHDVVDDEEN LIDNGVRPTI RATVVQASTI FYDTPATLDK AERLIAGAAA YGAELVVFPE  180
AFVGGYPRIP NFGVTGGRNS IEENDEFQKY HASAIDVPGP EVDRLAGIAR KYEVHLVMGV  240
VEREGSILYS SVIYFDCQGQ YLGGHRKVML TALEHDVWHS GDKATLPAYK TSIGNIGGLI  300
CWDNRMPLLR SELYSKGVEI YCVPTADARD TWRASMTHTA IEGGCFVISA NQYCQRKDYP  360
LQQQCVSGDS NSELSPDSVV CSGGSIIISP SGAILAGPNY QEESLISADL DLGEIERAKL  420
EFHGVVGVGH TVWPESLNPL AFTAKVENC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-19	TCP family protein