PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425488.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-X1
Protein Properties Length: 870aa    MW: 97532.4 Da    PI: 8.4181
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425488.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X122.23e-07236255120
        zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                     CG H+C+ +CH G CppC++
  XP_026425488.1 236 CGVHRCNVICHQGLCPPCKA 255
                     ******************95 PP

2zf-NF-X117.21.1e-05396415120
        zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                     CG+H C + C+ G+CppC++
  XP_026425488.1 396 CGRHACRRRCCDGDCPPCSE 415
                     ******************85 PP

3zf-NF-X117.96.7e-06423442120
        zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                     C +HkC ++CH+G C pCp+
  XP_026425488.1 423 CNNHKCPSPCHRGACAPCPL 442
                     668***************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 870 aa     Download sequence    
MAATEIQHYP VSDSDNDSDN GKDELRHTDL EETIFKSYLQ LNTTNSSSSQ PDLSKIKSFL  60
NSSRSGALSC MICLERIRLT DPTWSCYKEC YAVFHLICIQ SWARQASDLA AARAASRLST  120
EHFPLAASNA ANWNCPKCRV EYSKTLIPSK YLCYCGKTQD PDSDPWILPH SCGEVCERPL  180
KYECGHYCLL LCHPGPCPAC PKLVKNRCFC GKIEDVKRCG FKDFTCNRVC EKKLDCGVHR  240
CNVICHQGLC PPCKAKGVYK CQCGKFEQER ECFERDFKCE NECGKLLGCG KHVCERGCHE  300
GKCGGCPYQG KRSCPCGKKV YEGMPCDAVL PTCGSTCEKM LSCGIHRCPE RCHKGSCNET  360
CRTVIIKSCR CGSLRKQVPC HQALACERKC NRGRDCGRHA CRRRCCDGDC PPCSEICDRK  420
LRCNNHKCPS PCHRGACAPC PLMVTISCSC GETRFEVPCG TEREQKPPKC PKRCSISPLC  480
RHAPNRKPHK CHYGACPPCR LVCEEEYPCG HNCKLRCHGP EPPPNPEFTL KSKKKKSNRK  540
PECTPGTPCP PCPELVWRSC VGQHIGAKQM MVCSKVKAFS CQNLCGNLLG CTNHYCTKPC  600
HALKSQTSIA DRSVRTEPCE ECHLPCEKER KLACPHPCPI PCHPGDCSPC KTLIKRSCHC  660
GAMVHVFECT RYNSLPENEQ LTIRSCAGHC HRKLPNCSHL CPEKCHPGQC PSPEKCSKKV  720
NVRCRCQNLK KEWLCQDVQA AYISTGCDPK DISKSQFGIG LLPCNSECAS KVKVVESALQ  780
LRKSKVPESK VTDAEPKVPK RRKRRDQVQE ATQVSRLQKI IATVRWFFIC ILILVAVVAA  840
AYYGYKGLLW LSDWMNEVEE RRPRKRFPNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1796802PKVPKRR
2797803KVPKRRK
3799805PKVPKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.10.0NF-X1 family protein