PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026424790.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 269aa    MW: 29450.3 Da    PI: 10.7133
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026424790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.51.4e-16220253134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++C tt TplWR+gp g ktLCnaCG+++ k+ 
  XP_026424790.1 220 CQWCFTTYTPLWRNGPHGLKTLCNACGIRFFKEQ 253
                     *****************************97765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MAFKPYKRTT LNSRPIMGNS NLLISTIDQS IIRDHLNSVP NKRQVVALIN SADNNHVTTA  60
HQQSKFSNVS SSKAIRDIDL NSIPVNDDDV SDSSALTPPR SLETVLKNSS GPETKRLKLN  120
SAGWRARSSH NNHYPALNNN NINNVRYFGL ANGATNTRGG GGGGGLSLLS NSMMRNHFSD  180
PASVENFFLM NYPNRSIMSS VAIFGVTVSG PNPPSAPKLC QWCFTTYTPL WRNGPHGLKT  240
LCNACGIRFF KEQKKVKAGV IKNIHGDRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18380.13e-14GATA family protein