PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026424190.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 251aa    MW: 28881.5 Da    PI: 5.7225
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026424190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.25.8e-2373163190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     ++Y +YA++ GF++r++++++s+ ++ ++  ++vCskeg+r ++   ++++   ++++r+gCka l++  ++  +kw+vt+++ eHnH+l+
  XP_026424190.1  73 DYYGAYARRNGFTIRVNRKRRSRIDEAVIGFDYVCSKEGFRPKRCLGEDRTILLSKQSRVGCKAILVIAYRReVEKWVVTNFVREHNHDLM 163
                     59******************************************9998889999***************99989**************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MNLNMSMTES TSHLGDLIGS NMVLDSEIFD EFEIEDCDNT SRQDNQLVEL TVDVGPSEPC  60
IGMEFNSADD GKDYYGAYAR RNGFTIRVNR KRRSRIDEAV IGFDYVCSKE GFRPKRCLGE  120
DRTILLSKQS RVGCKAILVI AYRREVEKWV VTNFVREHNH DLMGPAEVLV RRSSVKASTE  180
DAKDKRIREL TSELYNERQR FQRRCSAYEE RCAAYKVNLG KILKDIELHS EHLSVSVSNI  240
LQTIKEVDDE H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.16e-36FAR1 family protein