PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424109.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 355aa MW: 40613.6 Da PI: 6.3961

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	99.3	2.3e-31	109	210	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 f+k ltpsdv+k++rlv+pk++ae++ +g+ ++ lt+ede g+ W+++++y+++s++yvltkGW++Fvk+++L +gD+v F++ +r + XP_026424109.1 109 FEKPLTPSDVGKLNRLVIPKQYAEKYfplsgdSGD--KGLLLTFEDELGKFWRFRYSYWNSSQSYVLTKGWSRFVKEKHLGAGDIVSFER-RRfD 200 99*************************965444..6779**********************************************6.5559 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++l+++++r XP_026424109.1 201 VQRLYIRWRR 210 9999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MMYHPTPKTP SSKYKGVVIP QPNERFGSQI YENHHRVWLE PYDTQQASST TTTMNEATLN 60 AQHIPYRDLN MINFEYDNHR DDEEDDTSTE VVDQQEEMER ENDEREYMFE KPLTPSDVGK 120 LNRLVIPKQY AEKYFPLSGD SGDKGLLLTF EDELGKFWRF RYSYWNSSQS YVLTKGWSRF 180 VKEKHLGAGD IVSFERRRFD VQRLYIRWRR GGAMPVQDSG VGQTAISSSA PPSNSNANTT 240 TGSWTRLYYS AHPYPSHHLH GPDYYQPDHC LHAGYAAETV VAEKPKAKQG NSKRLRLFGV 300 NLDCQLDEPD VSPFSNPVPA QVVYSHGDGS NHKDYNYSTS LNQRGNSGRG SGSDL

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MMYHPTPKTP SSKYKGVVIP QPNERFGSQI YENHHRVWLE PYDTQQASST TTTMNEATLN  60
AQHIPYRDLN MINFEYDNHR DDEEDDTSTE VVDQQEEMER ENDEREYMFE KPLTPSDVGK  120
LNRLVIPKQY AEKYFPLSGD SGDKGLLLTF EDELGKFWRF RYSYWNSSQS YVLTKGWSRF  180
VKEKHLGAGD IVSFERRRFD VQRLYIRWRR GGAMPVQDSG VGQTAISSSA PPSNSNANTT  240
TGSWTRLYYS AHPYPSHHLH GPDYYQPDHC LHAGYAAETV VAEKPKAKQG NSKRLRLFGV  300
NLDCQLDEPD VSPFSNPVPA QVVYSHGDGS NHKDYNYSTS LNQRGNSGRG SGSDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	1e-52	B3 family protein