PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026424089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 199aa MW: 22460.4 Da PI: 5.156 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 55.6 | 6.8e-18 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ie+ +r+v f+kRr+g++KKA L+ L++a+++++++s+ g+ y +ss XP_026424089.1 9 KKIEDRKKRNVAFTKRRHGLFKKAADLCQLTGADISLLVISPGGNPYSFSS 59 68*******************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MGKRRIEIKK IEDRKKRNVA FTKRRHGLFK KAADLCQLTG ADISLLVISP GGNPYSFSSS 60 SISLNDLHYR LSNAINVKEE KVADDETTRV TDDGFWWNNL NPEEIDSIEK LTAVRNQLLD 120 VKEKVAQRKQ ELLAAAAKPI DIATSTSTTT TCTVVEKMKE DSSLLEDDLG MLLSDCYDDA 180 QNWLPSIESL HNFESWLLN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 17 | KRRIEIKKIEDRKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36590.1 | 3e-11 | M-type_MADS family protein |