PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026423930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | WRKY | ||||||||
Protein Properties | Length: 196aa MW: 22974.4 Da PI: 8.9272 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 75.7 | 5.4e-24 | 5 | 62 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +dD+y+WrKYG v g+++prsYYrC ++C + k+v+rs+edp+++++tY+ +H++ XP_026423930.1 5 VDDEYSWRKYGMNYVFGARYPRSYYRCKLQRCLALKQVQRSEEDPSTFVVTYRRRHTC 62 59******************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MDGPVDDEYS WRKYGMNYVF GARYPRSYYR CKLQRCLALK QVQRSEEDPS TFVVTYRRRH 60 TCIQFSNRHD QLDEKRQRRS LDTVINFQTG CHVKTEESGE EKVVLKSPSL SFPSAPLPTP 120 TLSIERDKNS SSMTTDNHSL HLTNEYKVIL VFHLMDRSLL ILFNYQVVLI KTVIIFLLIV 180 EIISIRCDVQ RTSLSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 2e-24 | WRKY family protein |