PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423902.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 427aa MW: 48869.8 Da PI: 6.8408

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.9	1.6e-56	18	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL kkv + k+++ ++i evd++k+ePwdLp+k+k +ekewyfF++rd+ky+tg r+nrat +gyWkatgkdke+++ XP_026423902.1 18 LPPGFRFHPTDEEIITHYLSKKVLNIKFSA-TAIGEVDLNKCEPWDLPNKAKMGEKEWYFFCQRDRKYPTGMRTNRATVAGYWKATGKDKEIYKG 111 79***********************999.88***********99999*************************************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 kg lvg+kktLvfy+grapkgekt+Wvmhe+rl XP_026423902.1 112 KGCLVGMKKTLVFYTGRAPKGEKTNWVMHEFRL 144 *****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MEEVPILINQ AAEDCIDLPP GFRFHPTDEE IITHYLSKKV LNIKFSATAI GEVDLNKCEP 60 WDLPNKAKMG EKEWYFFCQR DRKYPTGMRT NRATVAGYWK ATGKDKEIYK GKGCLVGMKK 120 TLVFYTGRAP KGEKTNWVMH EFRLDGKFSH YNLPKTAKDE WVVCRVFLKN SSTGGILKKV 180 SPYSGMLRMN SFGFVDDYLL DSPSSLPPLM DNSSPNYNSS SRPSTSSYTN EDEFKTTISG 240 QLPNYISSRT MDHQQQQDNK NLLVPNYNYN MMNQQVMMMN QFPSSNATPN SSMFYPQIPQ 300 NMSCLQKEQR SVAANTNAIP SFPDSSNFMP QQARLRALAD QTNQKFDQMK RLNDYECKVE 360 QQFTSNNHSM VSHCSQDTGL SNDVNVEISS VQHDMAAENN GYGEDPSHQQ RHTSDDLNLD 420 YLIWNYQ

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MEEVPILINQ AAEDCIDLPP GFRFHPTDEE IITHYLSKKV LNIKFSATAI GEVDLNKCEP  60
WDLPNKAKMG EKEWYFFCQR DRKYPTGMRT NRATVAGYWK ATGKDKEIYK GKGCLVGMKK  120
TLVFYTGRAP KGEKTNWVMH EFRLDGKFSH YNLPKTAKDE WVVCRVFLKN SSTGGILKKV  180
SPYSGMLRMN SFGFVDDYLL DSPSSLPPLM DNSSPNYNSS SRPSTSSYTN EDEFKTTISG  240
QLPNYISSRT MDHQQQQDNK NLLVPNYNYN MMNQQVMMMN QFPSSNATPN SSMFYPQIPQ  300
NMSCLQKEQR SVAANTNAIP SFPDSSNFMP QQARLRALAD QTNQKFDQMK RLNDYECKVE  360
QQFTSNNHSM VSHCSQDTGL SNDVNVEISS VQHDMAAENN GYGEDPSHQQ RHTSDDLNLD  420
YLIWNYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04060.1	1e-104	NAC family protein