PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423675.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 434aa MW: 47410.1 Da PI: 9.6817

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	9e-05	199	221	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg+ F ++ L+ H + H XP_026423675.1 199 TCHKCGEKFGKWEGLEAHHLSkH 221 7*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MKSFGKTQKE VVVEEEKKKK SPTVWFSLKK SLQCKSDPAD VFDPKTARNG NFDNNQNGGL 60 ASILTKRTSR SGCSRSIANL KDVIHGSKRH LEKPICSPRS IGSNELINPL AHEVILSDSK 120 CELKITGYNG GLHEGNGGGG SGFVGTLTPG TPGPGGTYSF KTPTRKSSTF YSDKEGFGGS 180 APKSRTSLDI DSNGSSSVTC HKCGEKFGKW EGLEAHHLSK HAVTELVEGD SSRKIVEIIC 240 QINSFKTENN LTRIERVLKV HNMQKTLARF EEYREMVKVK ASKLPKKHPR CQADGNELLR 300 FYGTTLACSL GMNGSSNLCV SEKCNVCRII RHGFSVKKEV KGGIGVFTTS TSGRAFESVE 360 LSEEENSSLK KALIVCRVIA GRVHRPLENF QERLAGQTGF DSLAGKMGPY SNIEELYLLN 420 PKALLPCFVV ICKP

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MKSFGKTQKE VVVEEEKKKK SPTVWFSLKK SLQCKSDPAD VFDPKTARNG NFDNNQNGGL  60
ASILTKRTSR SGCSRSIANL KDVIHGSKRH LEKPICSPRS IGSNELINPL AHEVILSDSK  120
CELKITGYNG GLHEGNGGGG SGFVGTLTPG TPGPGGTYSF KTPTRKSSTF YSDKEGFGGS  180
APKSRTSLDI DSNGSSSVTC HKCGEKFGKW EGLEAHHLSK HAVTELVEGD SSRKIVEIIC  240
QINSFKTENN LTRIERVLKV HNMQKTLARF EEYREMVKVK ASKLPKKHPR CQADGNELLR  300
FYGTTLACSL GMNGSSNLCV SEKCNVCRII RHGFSVKKEV KGGIGVFTTS TSGRAFESVE  360
LSEEENSSLK KALIVCRVIA GRVHRPLENF QERLAGQTGF DSLAGKMGPY SNIEELYLLN  420
PKALLPCFVV ICKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-158	C2H2 family protein