PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423576.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 413aa MW: 46768 Da PI: 5.3643

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.7	2.9e-13	203	262	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+++ ++g+++A+++d ++ g ++ k++ lg ++ +e+Aa+ ++ ++k++g XP_026423576.1 203 SKYHGVTRHFWTGKFEAHLWDnSYIrEGhrRKgKQVFLGQYDNEEKAAQSYDLVALKYWG 262 89*****************666676686336**********************987 PP
2	AP2	38.5	2.9e-12	306	356	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++ +grW A+I p g r+ +lg+f ++e+Aaka++ a +++g XP_026423576.1 306 SVYRGVTRHG-DGRWQARISGiP---G-RRGLHLGTFSSEEDAAKAYDIASIRYRG 356 78***999.9**76666...4.7**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MAFMNLLDER SSLDDEEHFN TNIFIKLQDS DEGCFESSFL ESAQSTVPFI VVNEKPSDYM 60 VSLVNPTVNE NCDGAPSDDT ELEPHPSLAD EQAPELLRIQ AVGQEVYGVC RPTNTESKSL 120 SRSENEKILE REDVSLSTNS CHEENAESQN SQPVLVSGTA MFLNLDHADD LVCSDEEKNL 180 GEFVPPDVST PIKSIQKVAH RTSKYHGVTR HFWTGKFEAH LWDNSYIREG HRRKGKQVFL 240 GQYDNEEKAA QSYDLVALKY WGLHASTRSN FPISTYKKQL EEMKEMSKEE FVMYIRRNSC 300 FKKGSSVYRG VTRHGDGRWQ ARISGIPGRR GLHLGTFSSE EDAAKAYDIA SIRYRGMKAF 360 TNFHVSNYSP LDSKESEGQL PEPKKLKKDV NLTESTIVIA KSDPRQDVRT QTV

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MAFMNLLDER SSLDDEEHFN TNIFIKLQDS DEGCFESSFL ESAQSTVPFI VVNEKPSDYM  60
VSLVNPTVNE NCDGAPSDDT ELEPHPSLAD EQAPELLRIQ AVGQEVYGVC RPTNTESKSL  120
SRSENEKILE REDVSLSTNS CHEENAESQN SQPVLVSGTA MFLNLDHADD LVCSDEEKNL  180
GEFVPPDVST PIKSIQKVAH RTSKYHGVTR HFWTGKFEAH LWDNSYIREG HRRKGKQVFL  240
GQYDNEEKAA QSYDLVALKY WGLHASTRSN FPISTYKKQL EEMKEMSKEE FVMYIRRNSC  300
FKKGSSVYRG VTRHGDGRWQ ARISGIPGRR GLHLGTFSSE EDAAKAYDIA SIRYRGMKAF  360
TNFHVSNYSP LDSKESEGQL PEPKKLKKDV NLTESTIVIA KSDPRQDVRT QTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20840.1	2e-74	AP2 family protein