PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423497.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 563aa MW: 61558.6 Da PI: 6.8352

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.2	1.9e-29	262	321	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+aed++++++tYeg+H h+ XP_026423497.1 262 MNDGCQWRKYGQKISKGNPCPRAYYRCTVAaGCPVRKQVQRCAEDKSILITTYEGNHSHP 321 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MEDTVMELRS STSLVSVKED HQENKQQVGA TDKLASSPSC TVEIDQKEED RNIEIKDHQE 60 LESTKVEMNE VRKENERLKL VLARILEDYQ SLQKHLVEAV QRGEQTQTNS GATLQTFPFR 120 QTLPMIQAQE ESELVSLSLG RTISSSSDKF SNYLSKFHKK ETDEDKLSKE GNLSLGLDCK 180 YEPDSSNSTS VDPVMIYPSP ENSFDNDDPK EDAGEKWQTT NNATSNGKAV IRSRDDEVSQ 240 QQQNPVKKPR VSVRTRCETP TMNDGCQWRK YGQKISKGNP CPRAYYRCTV AAGCPVRKQV 300 QRCAEDKSIL ITTYEGNHSH PLSVSASAMA STTSAAASML MSGSSNSRLA LASGSSGYTT 360 TSANLHGLNF SNLSSSSATG SKQIFYIPNS SVSSASSSNP TITLDLTTPS SSSLSSLSHL 420 NRPSSNNNYP TSTHKYSSTS FNFSSPSFDQ SKSFTTLPTS WSNGYLSYGS NHQPYKLQNQ 480 TGSLNFSSSR HTQDHQFYQK YPSLNKNSIS TNPSVAQQSL TEDTIAAATK ALTSDPVFQS 540 ALASAVTSIV GPGGSGKWPS TDH

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MEDTVMELRS STSLVSVKED HQENKQQVGA TDKLASSPSC TVEIDQKEED RNIEIKDHQE  60
LESTKVEMNE VRKENERLKL VLARILEDYQ SLQKHLVEAV QRGEQTQTNS GATLQTFPFR  120
QTLPMIQAQE ESELVSLSLG RTISSSSDKF SNYLSKFHKK ETDEDKLSKE GNLSLGLDCK  180
YEPDSSNSTS VDPVMIYPSP ENSFDNDDPK EDAGEKWQTT NNATSNGKAV IRSRDDEVSQ  240
QQQNPVKKPR VSVRTRCETP TMNDGCQWRK YGQKISKGNP CPRAYYRCTV AAGCPVRKQV  300
QRCAEDKSIL ITTYEGNHSH PLSVSASAMA STTSAAASML MSGSSNSRLA LASGSSGYTT  360
TSANLHGLNF SNLSSSSATG SKQIFYIPNS SVSSASSSNP TITLDLTTPS SSSLSSLSHL  420
NRPSSNNNYP TSTHKYSSTS FNFSSPSFDQ SKSFTTLPTS WSNGYLSYGS NHQPYKLQNQ  480
TGSLNFSSSR HTQDHQFYQK YPSLNKNSIS TNPSVAQQSL TEDTIAAATK ALTSDPVFQS  540
ALASAVTSIV GPGGSGKWPS TDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	8e-60	WRKY family protein