PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026423377.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 618aa    MW: 69854.5 Da    PI: 7.2425
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026423377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26025.82.9e-08192293195
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpa.....eqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearard.PvyGavgvilklqqqle 88 
                     +C aC +l r+C+ dC +a+ f +      ++  +  +++ + a n     ++l  +e  ++ +++ ++e e+rar  P yGa+g++ +l ++l 
  XP_026423377.1 192 RCTACIYLARNCPVDCWFAEFFQEdfwgdFEAVCHTKFERTYLAYNSRTRRQELTGDEiTQIRATTTLFEREIRARScPDYGATGIVITLVRRLL 286
                     6*********************772221144555666677787888888888886666578999999********976************99998 PP

          DUF260  89 qlkaela 95 
                      ++a ++
  XP_026423377.1 287 AVNASID 293
                     8887766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    
MDIHQLCIVC KYWRISPWAQ PQPGCLHERH HRLFRADDIV ATFMYYNTGP SSVLPNTDYF  60
NRIRVRDSTR RFEAAIRSHD DVYGITGIII LLESILYVNS VLRDVQMFYA RYYGLYPPAA  120
VPIRQDYPER PRQQTPSFSN SLVSSTSAQH SQRTPSFSNS LVSTSAHQSQ QTTRFSNSLV  180
SSNSAQQSQH QRCTACIYLA RNCPVDCWFA EFFQEDFWGD FEAVCHTKFE RTYLAYNSRT  240
RRQELTGDEI TQIRATTTLF EREIRARSCP DYGATGIVIT LVRRLLAVNA SIDFLEEISA  300
DRVQQLVEQY HSRQVPRYPA PTNVNTGGPG QQQHFQRGVA KRTLEQGGPP IPQQRPRLPG  360
PPIPLQPPRL QQPAQFVLLH HPTPFQQPSP PAAFQQPSYD VQMQGYQARP LPQSQEPAMP  420
SQSEQLLAGI NSSSTATSSQ SQFQSQQHHY FSSGISSSAA AVGQPHPHHQ EPPDPYGLAT  480
IQFSDDEKDT YWGKEQKRLA EEQKQLYQGL PPYQVQMQGY ETPPVSQSQE PAVPSQSQHL  540
FTGTNSSSTA TSSQSQFQSQ QQHYLSSGIS SSAAAVGQPH PHHQEPPDPY GLATIQFSDD  600
EKDTYWGKEQ KQLKEGPR