PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026423159.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 446aa MW: 48753.9 Da PI: 7.5697 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 32.8 | 1.2e-10 | 43 | 68 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ++++ C ++ rtG C yG++C+F+H+ XP_026423159.1 43 PGEPDCIYYIRTGLCGYGNNCRFNHP 68 5789*********************8 PP | |||||||
2 | zf-CCCH | 37 | 5.8e-12 | 89 | 112 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 + C++f++tGtC++G +Ck++H++ XP_026423159.1 89 PDCQYFLKTGTCRFGVTCKYNHPQ 112 79********************97 PP | |||||||
3 | zf-CCCH | 34.2 | 4.2e-11 | 133 | 157 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +++C++++rtG CkyG CkF+H++ XP_026423159.1 133 EKPCPHYMRTGVCKYGFACKFNHPQ 157 689********************97 PP | |||||||
4 | zf-CCCH | 39.3 | 1.1e-12 | 284 | 309 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C+++++tGtCk+G++Ck++H++ XP_026423159.1 284 DQPECQYYMKTGTCKFGPTCKYHHPR 309 689*********************96 PP | |||||||
5 | zf-CCCH | 31.9 | 2.3e-10 | 329 | 354 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +++++C f++ +G+Ck+G +Ck+ H+ XP_026423159.1 329 PGQAICTFYSLYGICKFGLSCKYDHP 354 5789*********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 446 aa Download sequence |
MPDSWKVKIN ASPDNLQEAM WRLKIQAQNG GVVANSSLYP DRPGEPDCIY YIRTGLCGYG 60 NNCRFNHPSS YPGQVAQYRG ELPERDGLPD CQYFLKTGTC RFGVTCKYNH PQDKDDARQI 120 QLNMLGLPIR QEEKPCPHYM RTGVCKYGFA CKFNHPQPAA VGSLPPITGN ASFGSTGSSV 180 APPLSGLPYV GGIPAWTLPT TPYLSGHRMQ GPQAYMPVVL SSSQGIITAP QGWNTYSGTA 240 NPVSSTNVLG SNFIYSSKHQ GELGINGQVH MLQTPEPQFP ERPDQPECQY YMKTGTCKFG 300 PTCKYHHPRE RTAPLATSTL SPYGLPLRPG QAICTFYSLY GICKFGLSCK YDHPLTGLHN 360 YNLGIPALSI PDPTFSCKRI STLAGSEEKS PSKSSISLSD QNEETDTTSI KHQCMDAETS 420 EEPKQQAVSS VNTSTTSLQL PLDASE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02830.1 | 2e-96 | C3H family protein |