PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422512.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 355aa MW: 40678.4 Da PI: 5.209

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	117.2	9.9e-37	43	135	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++++++++++sws++gn+fvv+d+++f+ ++Lp+ Fkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+k+ll++ XP_026422512.1 43 FLTKTYEMVDNPSTDHIVSWSRTGNTFVVWDPHTFSVELLPRCFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEEFLRGHKHLLKN 128 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k + XP_026422512.1 129 IRRRKAT 135 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNPVKKEFTG ISSISYADDG HQQSMIPAPQ PLEGLHDPGP PPFLTKTYEM VDNPSTDHIV 60 SWSRTGNTFV VWDPHTFSVE LLPRCFKHNN FSSFVRQLNT YGFRKVDPDR WEFANEEFLR 120 GHKHLLKNIR RRKATSVSPL QQQNLGACVE VGRFGLDGEI NRLRRDKQVL MGELVKLRQQ 180 QQNTREYLQA MEQRLQGTEA KQQQMMNFLA RAMQNPAFIQ QLVDQKDKRK ELEEAITKKR 240 RRQIDQGNSN LGIGVSIHSY GEDAIKTEQH NFGFAVSELE TLASEMQGYN QGGTEQGEAQ 300 REEEAAWKPE DVVLDNNFWE ELLNEKIGEE NIEGTEDEDV SVLADRLGYL GSSPQ

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNPVKKEFTG ISSISYADDG HQQSMIPAPQ PLEGLHDPGP PPFLTKTYEM VDNPSTDHIV  60
SWSRTGNTFV VWDPHTFSVE LLPRCFKHNN FSSFVRQLNT YGFRKVDPDR WEFANEEFLR  120
GHKHLLKNIR RRKATSVSPL QQQNLGACVE VGRFGLDGEI NRLRRDKQVL MGELVKLRQQ  180
QQNTREYLQA MEQRLQGTEA KQQQMMNFLA RAMQNPAFIQ QLVDQKDKRK ELEEAITKKR  240
RRQIDQGNSN LGIGVSIHSY GEDAIKTEQH NFGFAVSELE TLASEMQGYN QGGTEQGEAQ  300
REEEAAWKPE DVVLDNNFWE ELLNEKIGEE NIEGTEDEDV SVLADRLGYL GSSPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	242	KRKELEEAITKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-124	HSF family protein