PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026422502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | AP2 | ||||||||
Protein Properties | Length: 279aa MW: 31403.5 Da PI: 9.4611 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.2 | 1.3e-15 | 82 | 140 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse....ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++g+++A+++d ++ ++ k k+++lg + t+e+Aa+a++ a++kl+g XP_026422502.1 82 NFRGVTRHRWTGKFEAHLWDNTTisetRKrKGKQVYLGGYETEEKAAQAYDLAALKLWG 140 69******************655665433555*************************98 PP | |||||||
2 | AP2 | 45.1 | 2.5e-14 | 185 | 236 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++ + rW A+I + + ++lg+++t+eeAa+a++ a+ kl+g XP_026422502.1 185 SIYRGVTRQHEGRRWQARIGRV-----AggRDIYLGTYDTEEEAAEAYDIAAVKLRG 236 57****98888999****9885.....234*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MGTLIPASEN EICLLNQEVS LIDQVSIVAD YERLPSSNDS SSKLIPPPSS SSSVNVNPAS 60 SSATGNEQVK KALYKVGQRT SNFRGVTRHR WTGKFEAHLW DNTTISETRK RKGKQVYLGG 120 YETEEKAAQA YDLAALKLWG AGAHSKMNFP IPNYAKEVEE MKDMSREEYI NSLRRKSICF 180 ARGNSIYRGV TRQHEGRRWQ ARIGRVAGGR DIYLGTYDTE EEAAEAYDIA AVKLRGMSAI 240 TNFHISNYYK EGSKELDIVP IDVTEKELPK VKIRRFIMP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17430.1 | 4e-72 | AP2 family protein |