PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422501.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 283aa MW: 31854 Da PI: 9.329

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.2	4.1e-13	82	144	2	55
AP2 2 gykGV....rwdkkrgrWvAeIrdpse....ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV ++++++g+++A+++d ++ ++ k k+++lg + t+e+Aa+a++ a++kl+g XP_026422501.1 82 NFRGVtslfCRHRWTGKFEAHLWDNTTisetRKrKGKQVYLGGYETEEKAAQAYDLAALKLWG 144 58999999999***********655665433555***********************98 PP
2	AP2	45	2.6e-14	189	240	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++ + rW A+I + + ++lg+++t+eeAa+a++ a+ kl+g XP_026422501.1 189 SIYRGVTRQHEGRRWQARIGRV-----AggRDIYLGTYDTEEEAAEAYDIAAVKLRG 240 57**988889999885.....234***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MGTLIPASEN EICLLNQEVS LIDQVSIVAD YERLPSSNDS SSKLIPPPSS SSSVNVNPAS 60 SSATGNEQVK KALYKVGQRT SNFRGVTSLF CRHRWTGKFE AHLWDNTTIS ETRKRKGKQV 120 YLGGYETEEK AAQAYDLAAL KLWGAGAHSK MNFPIPNYAK EVEEMKDMSR EEYINSLRRK 180 SICFARGNSI YRGVTRQHEG RRWQARIGRV AGGRDIYLGT YDTEEEAAEA YDIAAVKLRG 240 MSAITNFHIS NYYKEGSKEL DIVPIDVTEK ELPKVKIRRF IMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	7e-70	AP2 family protein