PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422240.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 364aa MW: 41038 Da PI: 4.5806

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.9	4.4e-35	36	127	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye++ed+ +++++sws + nsf+v+d++++a+++Lp+yFkh nf+SFvRQLn+YgFkkv+ ++ weF+++ F g+k+ll++ XP_026422240.1 36 FLTKTYEMVEDPGTDSIVSWSVTRNSFIVWDSHKLASSLLPRYFKHGNFSSFVRQLNTYGFKKVDPDR---------WEFANEGFLGGQKHLLKY 121 9******************999*************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_026422240.1 122 IKRRRN 127 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MVSSTSSATS SSPSSSSSTI SPLPMEGLHD IGPPPFLTKT YEMVEDPGTD SIVSWSVTRN 60 SFIVWDSHKL ASSLLPRYFK HGNFSSFVRQ LNTYGFKKVD PDRWEFANEG FLGGQKHLLK 120 YIKRRRNIAQ NMQQQGLSAC VELGKFGLED EIDRLKRDRS VLMSQVVRLR QQQQDSEGEI 180 VVIEKRLQVI ESKQRNLMGF LAKALKNSDF VHQLISRNEQ NKELGHGIGT GKRRRLLAST 240 SAEVLHLEGI LEDIQVEDYL DHAVKEETVI ESDVETLYAT ANTELNNLIQ ESDSGLGSFS 300 DFIWEKSLVE DMVSGYEEAE MKVGDQFDCL GDVQLEDLVA DPSEWGDELA QELVDHMEFP 360 ESKP

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MVSSTSSATS SSPSSSSSTI SPLPMEGLHD IGPPPFLTKT YEMVEDPGTD SIVSWSVTRN  60
SFIVWDSHKL ASSLLPRYFK HGNFSSFVRQ LNTYGFKKVD PDRWEFANEG FLGGQKHLLK  120
YIKRRRNIAQ NMQQQGLSAC VELGKFGLED EIDRLKRDRS VLMSQVVRLR QQQQDSEGEI  180
VVIEKRLQVI ESKQRNLMGF LAKALKNSDF VHQLISRNEQ NKELGHGIGT GKRRRLLAST  240
SAEVLHLEGI LEDIQVEDYL DHAVKEETVI ESDVETLYAT ANTELNNLIQ ESDSGLGSFS  300
DFIWEKSLVE DMVSGYEEAE MKVGDQFDCL GDVQLEDLVA DPSEWGDELA QELVDHMEFP  360
ESKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	125	LKYIKRR
2	232	236	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-109	HSF family protein