PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026421521.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 359aa MW: 40566.1 Da PI: 7.4999 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 73.3 | 2e-23 | 9 | 53 | 1 | 45 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 kr en+s rqvt+skRr+gilKKA ELS+LCd+++a+++fs+tgk XP_026421521.1 9 KRLENTSGRQVTYSKRRAGILKKARELSILCDIDIALLMFSPTGK 53 789****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MGRVKLKIKR LENTSGRQVT YSKRRAGILK KARELSILCD IDIALLMFSP TGKPTLCLGE 60 RSNIEEVIAK FAQLTPQERA KRKLESLEAL KKTFKKLDHD VNIQEFLGTS TQTVEELTNQ 120 SRLLQAQLSE MRKRLSCWRD PNKINNIEDL TIMENSVKES LARVTLHKEN FGKQPLMLLD 180 CDQFPNGMNL PLVMGGDQQA QPPIWLPNND GQEMMLRENP NVLAQRNIEC STDPSIHNYN 240 GYHLGTGKQP EMDSACQEGS TLHELNRNAC LSLQLGGQMP SFASYSLNLL NNKSFKADEK 300 MTLQEPPMDY QVSSSNSFDP PSHRYDTYES GWASSSGHCA VPMFDGTLYH PHPRAQQPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03060.2 | 5e-96 | M-type_MADS family protein |