PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026421235.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 250aa    MW: 29109.6 Da    PI: 9.8905
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026421235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.93e-2250143190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     ++Y+eY++++GFsvrk++s+ + r   it+  fvC +eg   e+  +   + k++r++++ +tgCka++++  +  ++ w+++++ ++HnH+l 
  XP_026421235.1  50 NYYKEYGNRLGFSVRKRSSYATARGPLITRVIFVCDCEGIYVEKPPRnevELKKKRNTSTMKTGCKAMIRIAFDIkHKMWYINEFIEKHNHPLI 143
                     69*************************************8766554445567888999999***********98779***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MFVAFLIVSY DILKRQMTDM EEDTGLPTNG KDLSKPAIYM RFSSIEEAEN YYKEYGNRLG  60
FSVRKRSSYA TARGPLITRV IFVCDCEGIY VEKPPRNEVE LKKKRNTSTM KTGCKAMIRI  120
AFDIKHKMWY INEFIEKHNH PLISPNKRHL MRSNKYMPPA ARCLAEQFNK QRLPVGKVAS  180
LFGNGENIGF TPRDVYNHLR TVRESLIEVG DAEALMNYFR KRTIENPSFY YAFKTDEVGR  240
AANIFWVDAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-27FAR1 family protein