PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026421226.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 197aa MW: 22405.2 Da PI: 4.6751 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 66 | 3.7e-21 | 11 | 59 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k i + +r+vtfskRr+g++KKA EL+ L++a++++ +fs++g+ly++ XP_026421226.1 11 KMIHDRKKRSVTFSKRRQGLFKKADELCRLTGADISLSVFSPSGRLYTF 59 67999*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MGTGRKKIEI KMIHDRKKRS VTFSKRRQGL FKKADELCRL TGADISLSVF SPSGRLYTFG 60 CPNSDEVLYR FPVKEEEKEV DGDGNNSRSE NGDGFWWNDL NIVELDTLEK VDAVTEQLLQ 120 VQNLVVKRKE ELLAALSTTS AAANETTTGN MEDSCMFSVK QEGDSWFPSL TSGYMNEFDE 180 LLKDFYVDQK MQQLPAY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 5 | 19 | RKKIEIKMIHDRKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36590.1 | 6e-22 | M-type_MADS family protein |