PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026421100.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 597aa MW: 65433.7 Da PI: 6.511

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026421100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.6	2.9e-28	99	152	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026421100.1 99 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVDRLTRENVASHLQKYRL 152 79*****************.******************************8 PP
2	Myb_DNA-binding	38.2	3.3e-12	101	151	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++t++++ s++qky+ XP_026421100.1 101 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvDRLTRENVASHLQKYR 151 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MRGITHGACD YLLKPVRIEE LKNIWQHVLR KKKVDPKDQN NLDNSDKLDS GMGDSGKGPE 60 NFGNDDRTKL NRKRKDQNEE DDDECDDDDE NDDPSSQKKP RVVWSVELHR KFVAAVNQLG 120 IDKAVPKKIL DLMNVDRLTR ENVASHLQKY RLYLKRISCV ASQQANMVAA LGGKDASYLR 180 MGSLDGLGDF HGFAGPGQLS NGSLASYSSA GMLGRLNASL GLGLRGPSSG MMQLGRPQNL 240 TNSVHDLGKL HQNGNFLQGM PMSLELDQLQ KSKSISRIGE FSSSIDSTAF SGPSNFSETG 300 VTIGNSNNSF LNVHSNSLLL QGVPQQTQNR VGFGDQSSRR MPSVNSESFE FEFGASSHLP 360 DQSGCNDNWP SAAPFNCFPS NPLPLGDNPF CHLDLSSGSL RENMSSINPS IGSNSFDVSS 420 NSVTTLHESR RDLQAGPIGV NVQHDKFSNF VNLGDDVGQS MNLVPKQKWI SHKQDYSQNS 480 NLLFSSSNPS VPIHGVVGAL GQNKNTMSNR KTDFISTSRP NSGSTPHLTR QNGIEKLSID 540 MTENFFLDQN KSHGGVVSNS CDSLEDLMSA MIKREQDELT SRDRDIGCDI FPVRTCM

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MRGITHGACD YLLKPVRIEE LKNIWQHVLR KKKVDPKDQN NLDNSDKLDS GMGDSGKGPE  60
NFGNDDRTKL NRKRKDQNEE DDDECDDDDE NDDPSSQKKP RVVWSVELHR KFVAAVNQLG  120
IDKAVPKKIL DLMNVDRLTR ENVASHLQKY RLYLKRISCV ASQQANMVAA LGGKDASYLR  180
MGSLDGLGDF HGFAGPGQLS NGSLASYSSA GMLGRLNASL GLGLRGPSSG MMQLGRPQNL  240
TNSVHDLGKL HQNGNFLQGM PMSLELDQLQ KSKSISRIGE FSSSIDSTAF SGPSNFSETG  300
VTIGNSNNSF LNVHSNSLLL QGVPQQTQNR VGFGDQSSRR MPSVNSESFE FEFGASSHLP  360
DQSGCNDNWP SAAPFNCFPS NPLPLGDNPF CHLDLSSGSL RENMSSINPS IGSNSFDVSS  420
NSVTTLHESR RDLQAGPIGV NVQHDKFSNF VNLGDDVGQS MNLVPKQKWI SHKQDYSQNS  480
NLLFSSSNPS VPIHGVVGAL GQNKNTMSNR KTDFISTSRP NSGSTPHLTR QNGIEKLSID  540
MTENFFLDQN KSHGGVVSNS CDSLEDLMSA MIKREQDELT SRDRDIGCDI FPVRTCM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	3e-70	ARR-B family protein