PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026421054.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 305aa    MW: 34780.9 Da    PI: 6.7268
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026421054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1927.5e-2994185291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn YA+++GFs+rk   ++s+r++ it+r fvCskeg+r+e+++   + + +r+ a+tr+gCka+l vkk+ +g+w+v++++ +HnHel+p
  XP_026421054.1  94 FYNGYARHMGFSIRKGPLYRSSRDRAITSRIFVCSKEGFRRETSDVndKGNVKRRMAVTRVGCKAQLWVKKQASGVWVVKQFQRDHNHELTP 185
                     9***************************************99887644666788999********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MWNPSEFLDN CYVKENSNGE LSTGPSREPI LSSGVSEDAF SDSLALLEAK TSNDDDTGVT  60
EICGEREVTS SNNDINLEPY IGKEFKSEQD AKAFYNGYAR HMGFSIRKGP LYRSSRDRAI  120
TSRIFVCSKE GFRRETSDVN DKGNVKRRMA VTRVGCKAQL WVKKQASGVW VVKQFQRDHN  180
HELTPMKPHL LRSHKNMLEN VKDYVETLKG VGVDTNKIQS LFVEEARAIG KIGETEKDTE  240
SEDKKKIHEL TVELHRERRR SAAYREQLNM VLKEVEDHAN YLSTKVEDIV ENLKEVESRG  300
TKDLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.18e-42FAR1 family protein