PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026421026.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 410aa MW: 46310.6 Da PI: 9.2179

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026421026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.3	1.1e-14	74	133	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g XP_026421026.1 74 SRFRGVSRHRWTGRFEAHLWDkGSWNVtqkKKgKQVYLGAYDDEECAARAYDLAALKYWG 133 789****************888855555447***********************98 PP
2	AP2	50.6	4.7e-16	176	227	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_026421026.1 176 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 227 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MEMTPVKCEV NTGVRRRLCN ENNETRVVKN VKRRRREPIV GVTSTSTNTE SKEQQQVDGS 60 SATSTTTTTI KRSSRFRGVS RHRWTGRFEA HLWDKGSWNV TQKKKGKQVY LGAYDDEECA 120 ARAYDLAALK YWGPTTFTNF PLTDYEKAIQ IMQNVTKEEY LASLRRKSSG FSRGVSKYRG 180 VARHHHNGRW EARIGRVFGN KYLYLGTYST QEEAAHAYDI AAIEYRGINA VTNFDLSTYI 240 RWLRPGTNAL VPCQEQQSNS EPQTFPKSSM LIPSNSLTVD EFGSPRNQEA LGKEISVSSC 300 SNRSSSSPTA LSLLLRSSVF RELVERNSYA TNDETDAEVA RHQARVAGED EFNRILCRRI 360 ADLPYGCPPS EDMPSIELQR QGESESASPV YNQSGQSLWN GMLTMPPTLH

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MEMTPVKCEV NTGVRRRLCN ENNETRVVKN VKRRRREPIV GVTSTSTNTE SKEQQQVDGS  60
SATSTTTTTI KRSSRFRGVS RHRWTGRFEA HLWDKGSWNV TQKKKGKQVY LGAYDDEECA  120
ARAYDLAALK YWGPTTFTNF PLTDYEKAIQ IMQNVTKEEY LASLRRKSSG FSRGVSKYRG  180
VARHHHNGRW EARIGRVFGN KYLYLGTYST QEEAAHAYDI AAIEYRGINA VTNFDLSTYI  240
RWLRPGTNAL VPCQEQQSNS EPQTFPKSSM LIPSNSLTVD EFGSPRNQEA LGKEISVSSC  300
SNRSSSSPTA LSLLLRSSVF RELVERNSYA TNDETDAEVA RHQARVAGED EFNRILCRRI  360
ADLPYGCPPS EDMPSIELQR QGESESASPV YNQSGQSLWN GMLTMPPTLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	15	36	RRRLCNENNETRVVKNVKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-90	AP2 family protein